Pre_GI: BLASTP Hits

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Query: NC_009699:3940984:3955837 Clostridium botulinum F str. Langeland chromosome, complete genome

Start: 3955837, End: 3956313, Length: 477

Host Lineage: Clostridium botulinum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium botulinum F strain Langeland was identified in 1958 from home-prepared liver paste involved in an outbreak of foodborne botulism on the island of Langeland, in Denmark. Produces botulinum, one of the most potent toxins known. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This organism produces one of the most potent and deadly neurotoxins known, a botulinum toxin that prevents the release of acetylcholine at the neuromuscular junction, thereby inhibiting muscle contraction and causing paralysis. In most cases the diseased person dies of asphyxiation as a result of paralysis of chest muscles involved in breathing. The spores are heat-resistant and can survive in inadequately heated, prepared, or processed foods. Spores germinate under favorable conditions (anaerobiosis and substrate-rich environment) and bacteria start propagating very rapidly, producing the toxin. Botulinum toxin, and C. botulinum cells, has been found in a wide variety of foods, including canned ones. Almost any food that has a high pH (above 4.6) can support growth of the bacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010516:3903867:391871239187123919188477Clostridium botulinum B1 str. Okra, complete genometranscriptional regulator, MarR family1e-82304
NC_017297:3939328:395418039541803954656477Clostridium botulinum F str. 230613 chromosome, complete genomeMarR family transcriptional regulator2e-82303
NC_009697:3809044:382389338238933824369477Clostridium botulinum A str. ATCC 19397 chromosome, completeMarR family transcriptional regulator6e-82302
NC_009495:3832500:384735938473593847835477Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeMarR family transcriptional regulator6e-82302
NC_012658:3923546:393841339384133938889477Clostridium botulinum Ba4 str. 657 chromosome, complete genomeMarR family transcriptional regulator8e-82301
NC_009698:3706154:372100337210033721479477Clostridium botulinum A str. Hall chromosome, complete genomeMarR family transcriptional regulator2e-81300
NC_012563:4101000:411587741158774116353477Clostridium botulinum A2 str. Kyoto, complete genometranscriptional regulator, MarR family2e-81300
NC_010520:3938490:395335339533533953829477Clostridium botulinum A3 str. Loch Maree, complete genometranscriptional regulator, MarR family5e-81299
NC_004557:81362:859488594886403456Clostridium tetani E88, complete genometranscriptional regulator, marR family7e-58222
NC_008593:37456:420304203042500471Clostridium novyi NT, complete genometranscriptional regulator, MarR family9e-55212
NC_015425:34861:412974129741770474Clostridium botulinum BKT015925 chromosome, complete genomeMarR family transcriptional regulator2e-54211
NC_015687:3766000:377998037799803780444465Clostridium acetobutylicum DSM 1731 chromosome, complete genomeMarR family transcriptional regulator8e-54208
NC_003030:3763054:377839737783973778861465Clostridium acetobutylicum ATCC 824, complete genomeTranscriptional regulator, MarR/EmrR family8e-54208
NC_017295:3762622:377774937777493778213465Clostridium acetobutylicum EA 2018 chromosome, complete genomeTranscriptional regulator, MarR/EmrR family8e-54208
NC_014393:4988127:500199150019915002452462Clostridium cellulovorans 743B chromosome, complete genomeregulatory protein MarR5e-51199
NC_021182:4882494:489591748959174896384468Clostridium pasteurianum BC1, complete genometranscriptional regulator1e-50198
NC_014328:4546390:456014745601474560623477Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative MarR family transcriptional regulator2e-50197
NC_010674:1170264:117469911746991175148450Clostridium botulinum B str. Eklund 17B, complete genomeMarR-family transcriptional regulator5e-49192
NC_010723:1133163:113855311385531139002450Clostridium botulinum E3 str. Alaska E43, complete genomeMarR-family transcriptional regulator8e-49192
NC_009617:1278000:128011812801181280567450Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeMarR family transcriptional regulator9e-48188
NC_020291:1266885:128943012894301289879450Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genometranscriptional regulator, MarR family2e-45181
NC_004668:2762464:276372527637252764177453Enterococcus faecalis V583, complete genometranscriptional regulator, MarR family3e-38157
NC_015391:1323171:133944613394461339895450Carnobacterium sp. 17-4 chromosome, complete genomeputative transcriptional regulator5e-38156
NC_015275:3299923:331354733135473314023477Clostridium lentocellum DSM 5427 chromosome, complete genomeregulatory protein MarR7e-36149
NC_016938:1492486:150347315034731503910438Melissococcus plutonius DAT561 chromosome 1, complete genomeMarR family transcriptional regulator3e-31134
NC_015977:3011177:303536230353623035814453Roseburia hominis A2-183 chromosome, complete genomeMarR family transcriptional regulator5e-28123
NC_006448:351998:372814372814373248435Streptococcus thermophilus LMG 18311, complete genometranscriptional regulator, MarR family5e-27119
NC_007929:473500:499199499199499639441Lactobacillus salivarius subsp. salivarius UCC118, complete genomeTranscriptional regulator, MarR family8e-27119
NC_013928:395028:415234415234415668435Streptococcus mutans NN2025, complete genometranscriptional regulator3e-24110
NC_010163:63209:816968169682133438Acholeplasma laidlawii PG-8A chromosome, complete genomeMarR family transcriptional regulator5e-22103
NC_018528:1932000:195252719525271952994468Lactobacillus helveticus R0052 chromosome, complete genomeMarR family transcriptional regulator2e-2097.8
NC_015602:1949610:194961019496101950077468Lactobacillus kefiranofaciens ZW3 chromosome, complete genomeMarR family transcriptional regulator7e-2096.3
NC_015574:806762:807398807398807838441Methanobacterium sp. SWAN-1 chromosome, complete genomeMarR family transcriptional regulator4e-0857
NC_014365:3123853:313873731387373139186450Desulfarculus baarsii DSM 2075 chromosome, complete genometranscriptional regulator, MarR family2e-0755.1
NC_020389:1936000:195655219565521957028477Methanosarcina mazei Tuc01, complete genomeTranscriptional regulator, MarR family2e-0754.7
NC_005945:754517:768676768676769137462Bacillus anthracis str. Sterne, complete genometranscriptional regulator, MarR family2e-0652
NC_010674:1390473:140885014088501409308459Clostridium botulinum B str. Eklund 17B, complete genometranscriptional regulator, MarR family3e-0651.2
NC_016048:1438721:1447283144728314487311449Oscillibacter valericigenes Sjm18-20, complete genomeputative MarR family transcriptional regulator3e-0651.2
NC_011772:323050:325020325020325502483Bacillus cereus G9842, complete genometranscriptional regulator, MarR family3e-0650.8
NC_011725:334000:338817338817339299483Bacillus cereus B4264 chromosome, complete genomeMarR family transcriptional regulator3e-0650.8
NC_014171:343834:347511347511347993483Bacillus thuringiensis BMB171 chromosome, complete genomeMarR family transcriptional regulator3e-0650.8
NC_014650:1862165:186382718638271864273447Geobacillus sp. Y4.1MC1 chromosome, complete genomeMarR family transcriptional regulator5e-0650.4
NC_015660:1869962:188270518827051883151447Geobacillus thermoglucosidasius C56-YS93 chromosome, completeMarR family transcriptional regulator8e-0649.7
NC_014551:1279229:130557213055721306045474Bacillus amyloliquefaciens DSM 7, complete genometranscriptional regulator RBAM_0121107e-0649.7
NC_017188:2172706:217630121763012176774474Bacillus amyloliquefaciens TA208 chromosome, complete genometranscriptional regulator7e-0649.7
NC_017190:1196356:122271112227111223184474Bacillus amyloliquefaciens LL3 chromosome, complete genomeHTH-type transcriptional regulator yvnA7e-0649.7
NC_017191:2174741:217833621783362178809474Bacillus amyloliquefaciens XH7 chromosome, complete genomeMarR family transcriptional regulator7e-0649.7
NC_006510:591339:615235615235615681447Geobacillus kaustophilus HTA426, complete genometranscriptional regulator (marR family)7e-0649.7
NC_016593:596500:622192622192622638447Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completetranscriptional regulator (MarR family) protein7e-0649.7
NC_016779:312500:327713327713328072360Bacillus cereus F837/76 chromosome, complete genomeMarR family transcriptional regulator9e-0649.3