Pre_GI: BLASTP Hits

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Query: NC_009092:2902171:2914896 Shewanella loihica PV-4, complete genome

Start: 2914896, End: 2917526, Length: 2631

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004347:3028000:3034793303479330374472655Shewanella oneidensis MR-1, complete genomeTonB-dependent receptor domain protein6e-102372
NC_014541:1280835:1305871130587113085432673Ferrimonas balearica DSM 9799 chromosome, complete genomeTonB-dependent receptor7e-96352
NC_008577:3125675:3131779313177931345922814Shewanella sp. ANA-3 chromosome 1, complete sequenceTonB-dependent receptor7e-89329
NC_011663:3181579:3188125318812531909322808Shewanella baltica OS223 chromosome, complete genomeTonB-dependent receptor3e-85317
NC_008322:2983951:2991848299184829947482901Shewanella sp. MR-7, complete genomeTonB-dependent receptor2e-83311
NC_011663:3181579:3193254319325431960462793Shewanella baltica OS223 chromosome, complete genomeTonB-dependent receptor2e-80301
NC_008321:2190000:2207398220739822100702673Shewanella sp. MR-4, complete genomeTonB-dependent receptor1e-77291
NC_008321:2922000:2931349293134929340722724Shewanella sp. MR-4, complete genomeTonB-dependent receptor2e-73277
NC_014012:3356629:3361888336188833648092922Shewanella violacea DSS12, complete genomeTonB-dependent receptor3e-73276
NC_009831:2045811:2059048205904820617292682Shewanella sediminis HAW-EB3, complete genomeTonB-dependent receptor, plug1e-72275
NC_014541:1280835:1302799130279913054202622Ferrimonas balearica DSM 9799 chromosome, complete genomeTonB-dependent receptor3e-67257
NC_014541:2510819:2510819251081925136412823Ferrimonas balearica DSM 9799 chromosome, complete genomeTonB-dependent receptor7e-66252
NC_009052:1899954:1910001191000119128172817Shewanella baltica OS155, complete genomeTonB-dependent receptor8e-62239
NC_009052:1899954:1906515190651519093042790Shewanella baltica OS155, complete genomeTonB-dependent receptor, plug5e-61236
NC_014541:1280835:1291430129143012942372808Ferrimonas balearica DSM 9799 chromosome, complete genomeTonB-dependent receptor9e-60232
NC_007508:4067862:4092016409201640948592844Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeTonB-dependent outer membrane receptor1e-57225
NC_011071:4000620:4000620400062040034542835Stenotrophomonas maltophilia R551-3, complete genomeTonB-dependent receptor3e-57224
NC_010688:2052619:2054809205480920577092901Xanthomonas campestris pv. campestris, complete genomeTonB-dependent outer membrane receptor precursor2e-53211
NC_003919:2956404:2970504297050429733982895Xanthomonas axonopodis pv. citri str. 306, complete genomeTonB-dependent receptor1e-50202
NC_014118:2417838:2430711243071124334672757Burkholderia sp. CCGE1002 chromosome chromosome 2, completeTonB-dependent receptor2e-46188
NC_015856:1152021:1155509115550911583102802Collimonas fungivorans Ter331 chromosome, complete genomeTonB-dependent receptor3e-46187
NC_010508:1898547:1914285191428519170052721Burkholderia cenocepacia MC0-3 chromosome 1, complete sequenceTonB-dependent receptor5e-43176
NC_014541:1280835:1288209128820912910522844Ferrimonas balearica DSM 9799 chromosome, complete genomeTonB-dependent receptor6e-39163
NC_015497:1058980:1072045107204510745762532Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomeTonB-dependent receptor2e-34148
NC_008228:3608909:3617682361768236205822901Pseudoalteromonas atlantica T6c, complete genomeTonB-dependent receptor6e-34146
NC_010688:605018:6255796255796284642886Xanthomonas campestris pv. campestris, complete genomeTonB-dependent outer membrane receptor1e-33145
NC_003902:624828:6456046456046484892886Xanthomonas campestris pv. campestris str. ATCC 33913, completehypothetical protein2e-33145
NC_007086:626891:6476676476676505522886Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein2e-33145
NC_015583:4879:1490314903176502748Novosphingobium sp. PP1Y plasmid Mpl, complete sequenceTonB-dependent receptor7e-33143
NC_016147:513819:5213995213995243262928Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeTonB-dependent receptor3e-32140
NC_010943:4527366:4540471454047145434462976Stenotrophomonas maltophilia K279a, complete genomeputative TonB dependent receptor1e-26122
NC_015947:4248536:4266001426600142689762976Burkholderia sp. JV3 chromosome, complete genomeTonB-dependent receptor1e-26122
NC_017271:3057161:3084101308410130870912991Xanthomonas campestris pv. raphani 756C chromosome, completeTonB-dependent outer membrane receptor9e-24112
NC_010338:2136193:2136193213619321392553063Caulobacter sp. K31, complete genomeTonB-dependent receptor4e-23110
NC_008700:2451798:2462458246245824656643207Shewanella amazonensis SB2B, complete genomeTonB-dependent receptor9e-22106
NC_015593:2841856:2885638288563828887123075Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeTonB-dependent receptor1e-21105
NC_015976:2150676:2159823215982321623842562Sphingobium sp. SYK-6, complete genomeTonB-dependent receptor-like protein2e-21105
NC_015976:3118804:3119860311986031229943135Sphingobium sp. SYK-6, complete genomeTonB-dependent receptor-like protein1e-20102
NC_011144:2710876:2726412272641227293842973Phenylobacterium zucineum HLK1, complete genomeTonB-dependent receptor2e-1998.6
NC_015580:1302000:1321387132138713239872601Novosphingobium sp. PP1Y, complete genomeTonB-dependent receptor9e-1996.3
NC_014013:112008:1120081120081149742967Sphingobium japonicum UT26S chromosome 2, complete genomeTonB-dependent receptor-like protein6e-1893.6
NC_015594:1210736:1229937122993712325102574Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeTonB-dependent receptor plug8e-1893.2
NC_015583:4879:6417641791732757Novosphingobium sp. PP1Y plasmid Mpl, complete sequenceTonB-dependent receptor2e-1791.7
NC_020541:468584:4862444862444886432400Rhodanobacter sp. 2APBS1, complete genomeouter membrane receptor for ferrienterochelin and colicins2e-1791.7
NC_020541:2694836:2699604269960427019792376Rhodanobacter sp. 2APBS1, complete genomeouter membrane cobalamin receptor protein4e-1790.9
NC_006526:1303635:1310721131072113131382418Zymomonas mobilis subsp. mobilis ZM4, complete genomeTonB-dependent receptor7e-1790.1
NC_018145:50237:6013060130625472418Zymomonas mobilis subsp. mobilis ATCC 29191 chromosome, completeTonB-dependent receptor plug2e-1688.6
NC_010338:650054:6500546500546531523099Caulobacter sp. K31, complete genomeTonB-dependent receptor3e-1687.8
NC_016147:513819:5351035351035378862784Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeTonB-dependent receptor5e-1687
NC_010943:1379707:1379707137970713824932787Stenotrophomonas maltophilia K279a, complete genomeputative TonB dependent receptor protein2e-1585.1
NC_017075:1233377:1249574124957412520602487Rubrivivax gelatinosus IL144, complete genomeputative TonB-dependent receptor1e-1379.7
NC_013722:751473:7556887556887581232436Xanthomonas albilineans, complete genomeputative tonb-dependent outer membrane receptor protein3e-1377.8
NC_003198:3586000:3601247360124736030911845Salmonella enterica subsp. enterica serovar Typhi str. CT18,vitamin B12 receptor protein5e-1377
NC_006511:4119332:4121860412186041237041845Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCvitamin B12 receptor protein5e-1377
NC_010688:449649:4603714603714629862616Xanthomonas campestris pv. campestris, complete genomeexported TonB-dependent transferrin-binding receptor8e-1376.6
NC_007086:459934:4731174731174757262610Xanthomonas campestris pv. campestris str. 8004, complete genomeTonB-dependent receptor8e-1376.6
NC_003902:461808:4725264725264751472622Xanthomonas campestris pv. campestris str. ATCC 33913, completeTonB-dependent receptor8e-1376.6
CU928160:4248621:4252870425287042547141845Escherichia coli IAI1 chromosome, complete genomevitamin B12/cobalamin outer membrane transporter2e-1275.1
NC_000913:4159090:4161662416166241635061845Escherichia coli K12, complete genomevitamin B12/cobalamin outer membrane transporter2e-1275.1
NC_010473:4256000:4261359426135942632031845Escherichia coli str. K-12 substr. DH10B, complete genomevitamin B12/cobalamin outer membrane transporter2e-1275.1
NC_010468:4455201:4466591446659144684351845Escherichia coli ATCC 8739, complete genomeTonB-dependent vitamin B12 receptor2e-1275.1
NC_020125:2080126:2080126208012620828672742Riemerella anatipestifer RA-CH-2, complete genomeOuter membrane receptor protein, mostly Fe transport2e-1275.1
NC_017271:4410500:4417282441728244198432562Xanthomonas campestris pv. raphani 756C chromosome, completeTonB-dependent receptor3e-1274.7
NC_006371:1997954:2001039200103920029881950Photobacterium profundum SS9 chromosome 2, complete sequencehypothetical receptor4e-1274.3
NC_005810:3493607:3497913349791334998741962Yersinia pestis biovar Microtus str. 91001, complete genomevitamin B12/cobalamin outer membrane transporter2e-1171.6
NC_010506:4873487:4873487487348748755322046Shewanella woodyi ATCC 51908, complete genomeTonB-dependent heme/hemoglobin receptor family protein9e-1169.7
NC_015682:379373:3793733793733812321860Thermodesulfobacterium sp. OPB45 chromosome, complete genomeTonB-dependent receptor3e-1068.2
NC_011144:2674242:2688413268841326909142502Phenylobacterium zucineum HLK1, complete genomeTonB-dependent receptor3e-1068.2
NC_013956:3273340:3296862329686232990692208Pantoea ananatis LMG 20103 chromosome, complete genomeCirA3e-1067.8
NC_018080:3448392:3473901347390134758621962Pseudomonas aeruginosa DK2 chromosome, complete genomeTonB-dependent receptor5e-1067.4
NC_016816:1137904:1139079113907911412532175Pantoea ananatis LMG 5342, complete genomeTonB-dependent siderophore receptor4e-1067.4
NC_008686:1592073:1608270160827016103122043Paracoccus denitrificans PD1222 chromosome 1, complete sequenceTonB-dependent receptor, plug6e-1067
NC_015500:2866027:2909442290944229114572016Treponema brennaborense DSM 12168 chromosome, complete genomeTonB-dependent receptor plug1e-0966.2
CP002797:4603787:4627269462726946293592091Escherichia coli NA114, complete genomePutative colicin I receptor precursor1e-0965.9
NC_006677:215466:2242262242262267332508Gluconobacter oxydans 621H, complete genomeTonB-dependent outer membrane receptor1e-0965.9
NC_007613:4403070:4403070440307044051602091Shigella boydii Sb227, complete genomeputative receptor1e-0965.9
NC_002695:1417912:1418370141837014204602091Escherichia coli O157:H7 str. Sakai, complete genomeIha1e-0965.9
NC_002655:1103991:1106535110653511086252091Escherichia coli O157:H7 EDL933, complete genomeputative receptor1e-0965.9
NC_013008:1354988:1362242136224213643322091Escherichia coli O157:H7 str. TW14359 chromosome, complete genomebifunctional enterobactin receptor/adhesin protein1e-0965.9
NC_013361:1335166:1338801133880113408912091Escherichia coli O26:H11 str. 11368 chromosome, complete genomebifunctional enterobactin receptor/adhesin protein1e-0965.9
NC_013364:1306756:1310392131039213124822091Escherichia coli O111:H- str. 11128, complete genomeputative adhesin1e-0965.9
NC_004431:3409389:3448776344877634508662091Escherichia coli CFT073, complete genomePutative receptor1e-0965.9
NC_014973:3151701:3151701315170131536591959Geobacter sp. M18 chromosome, complete genomeTonB-dependent receptor1e-0965.9
NC_011751:3453683:3470427347042734725172091Escherichia coli UMN026 chromosome, complete genomebifunctional enterobactin receptor/adhesin protein1e-0965.9
NC_009439:918534:9185349185349207652232Pseudomonas mendocina ymp, complete genomeTonB-dependent receptor2e-0965.5
NC_006347:2861498:2882669288266928847952127Bacteroides fragilis YCH46, complete genomeputative TonB-dependent outer membrane protein2e-0965.1
NC_017187:691769:7017767017767040402265Arcobacter butzleri ED-1, complete genomeiron-regulated outer membrane virulence protein4e-0964.3
NC_011026:1181940:1197951119795112000862136Chloroherpeton thalassium ATCC 35110, complete genomeTonB-dependent receptor plug9e-0963.2
NC_015963:4500:2389923899259922094Enterobacter asburiae LF7a plasmid pENTAS01, complete sequenceTonB-dependent receptor2e-0861.6
NC_014910:3458475:3458475345847534602681794Alicycliphilus denitrificans BC chromosome, complete genometonb-dependent receptor plug3e-0861.6
NC_015422:1163752:1184048118404811858411794Alicycliphilus denitrificans K601 chromosome, complete genomeTonB-dependent receptor plug3e-0861.6
NC_013520:120214:1223011223011242831983Veillonella parvula DSM 2008, complete genomeTonB-dependent receptor plug3e-0861.2
NC_014800:329861:3473643473643493491986Pseudoalteromonas sp. SM9913 chromosome chromosome II, completeenterobactin receptor protein4e-0860.8
NC_014623:9038177:9062306906230690641981893Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeTonB-dependent receptor6e-0860.5
NC_007912:909112:9325969325969345181923Saccharophagus degradans 2-40, complete genomeOuter membrane cobalamin receptor protein-like6e-0860.5
NC_008563:3332114:3344416334441633464642049Escherichia coli APEC O1, complete genomeiron-regulated element5e-0860.5
CP002797:4656327:4656327465632746583752049Escherichia coli NA114, complete genomePutative iron regulated outer membrane virulence protein5e-0860.5
NC_009431:40917:4250742507446092103Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA03, completehypothetical protein5e-0860.5
NC_011742:3245500:3259200325920032612482049Escherichia coli S88 chromosome, complete genomeiron-regulated outer membrane virulence protein5e-0860.5
NC_016510:2175000:2190171219017121924292259Flavobacterium columnare ATCC 49512 chromosome, complete genometonb-dependent receptor plug8e-0860.1
NC_014655:1835848:1851867185186718537651899Leadbetterella byssophila DSM 17132 chromosome, complete genometonb-dependent receptor9e-0859.7
NC_011296:1151346:1155651115565111576151965Thermodesulfovibrio yellowstonii DSM 11347, complete genomeTonB-dependent receptor-related protein1e-0759.3
NC_005125:2269343:2269343226934322714002058Gloeobacter violaceus PCC 7421, complete genomehypothetical protein1e-0759.3
NC_014935:1834569:1853521185352118553441824Nitratifractor saLSUginis DSM 16511 chromosome, complete genometonb-dependent receptor plug1e-0759.3
NC_013520:120214:1202141202141221571944Veillonella parvula DSM 2008, complete genomeTonB-dependent receptor plug2e-0758.5
NC_014926:165312:1838611838611856841824Thermovibrio ammonificans HB-1 chromosome, complete genomeTonB-dependent receptor plug2e-0758.5
NC_011026:2624775:2642802264280226449402139Chloroherpeton thalassium ATCC 35110, complete genomeTonB-dependent receptor plug3e-0758.2
NC_014541:1617678:1638650163865016405631914Ferrimonas balearica DSM 9799 chromosome, complete genomeTonB-dependent receptor4e-0757.4
NC_016776:3181706:3186704318670431888482145Bacteroides fragilis 638R, complete genomeputative exported TonB-dependent receptor protein5e-0757.4
NC_013520:1936209:1950535195053519525982064Veillonella parvula DSM 2008, complete genomeTonB-dependent receptor6e-0757
NC_003228:3143470:3149210314921031513542145Bacteroides fragilis NCTC 9343, complete genomeputative exported TonB-dependent receptor protein5e-0757
NC_006347:3082921:3087919308791930900632145Bacteroides fragilis YCH46, complete genomeTonB-dependent receptor5e-0757
NC_011059:1391734:1398678139867814007742097Prosthecochloris aestuarii DSM 271, complete genomeTonB-dependent receptor2e-0655.5
NC_005125:2107088:2119165211916521214082244Gloeobacter violaceus PCC 7421, complete genomehypothetical protein2e-0655.1
NC_014838:589581:5965455965455987372193Pantoea sp. At-9b plasmid pPAT9B01, complete sequenceTonB-dependent siderophore receptor2e-0655.1
NC_007951:1042291:1059087105908710609581872Burkholderia xenovorans LB400 chromosome 1, complete sequencePutative outer membrane cobalamin receptor, TonB dependent3e-0655.1
NC_015968:1165829:1175756117575611780112256Enterobacter asburiae LF7a chromosome, complete genomeTonB-dependent siderophore receptor3e-0654.7
NC_009648:4656187:4660313466031346621691857Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomevitamin B12/cobalamin outer membrane transporter4e-0654.3
NC_014963:2972358:2987321298732129893632043Terriglobus saanensis SP1PR4 chromosome, complete genomeTonB-dependent receptor4e-0654.3
NC_013943:1019213:1038636103863610407652130Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomeTonB-dependent receptor4e-0654.3
NC_015222:1492500:1506214150621415080671854Nitrosomonas sp. AL212 chromosome, complete genomeTonB-dependent vitamin B12 receptor5e-0653.9
NC_009092:1935281:1940184194018419423162133Shewanella loihica PV-4, complete genomeTonB-dependent receptor7e-0653.5
NC_013520:120214:1347501347501366181869Veillonella parvula DSM 2008, complete genomeTonB-dependent receptor7e-0653.5
NC_017192:2153461:2164451216445121663761926Arcobacter sp. L, complete genomeTonB-dependent receptor9e-0653.1
NC_018645:4945698:4966070496607049681062037Desulfobacula toluolica Tol2, complete genomeTonB-dependent receptor9e-0653.1