Pre_GI: BLASTP Hits

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Query: NC_008593:2457594:2496071 Clostridium novyi NT, complete genome

Start: 2496071, End: 2496568, Length: 498

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015425:2690448:273035727303572730866510Clostridium botulinum BKT015925 chromosome, complete genomeMutT/nudix family protein3e-66250
NC_008262:654000:667786667786668325540Clostridium perfringens SM101, complete genomehydrolase, NUDIX family9e-57219
NC_008261:676000:689535689535690074540Clostridium perfringens ATCC 13124, complete genomehydrolase, NUDIX family2e-56218
NC_021182:93000:107333107333107872540Clostridium pasteurianum BC1, complete genomeZn-finger containing NTP pyrophosphohydrolase8e-54209
NC_009698:38000:423994239942887489Clostridium botulinum A str. Hall chromosome, complete genomeNUDIX family hydrolase2e-47187
NC_009697:38000:423994239942887489Clostridium botulinum A str. ATCC 19397 chromosome, completeNUDIX family hydrolase2e-47187
NC_009495:38000:423844238442872489Clostridium botulinum A str. ATCC 3502 chromosome, complete genomehydrolase, NUDIX family2e-47187
NC_010516:42475:424754247542963489Clostridium botulinum B1 str. Okra, complete genomehydrolase, NUDIX family9e-47185
NC_010520:35845:365933659337081489Clostridium botulinum A3 str. Loch Maree, complete genomehydrolase, NUDIX family9e-47185
NC_012563:36000:367983679837286489Clostridium botulinum A2 str. Kyoto, complete genomehydrolase, NUDIX family9e-47185
NC_009699:33452:377413774138229489Clostridium botulinum F str. Langeland chromosome, complete genomeNUDIX family hydrolase9e-47185
NC_017297:33519:378093780938297489Clostridium botulinum F str. 230613 chromosome, complete genomeNUDIX family hydrolase9e-47185
NC_012658:35500:363743637436862489Clostridium botulinum Ba4 str. 657 chromosome, complete genomeNUDIX family hydrolase5e-46183
NC_003366:728859:742291742291742764474Clostridium perfringens str. 13, complete genomehypothetical protein8e-45179
NC_014833:3161257:317073831707383171259522Ruminococcus albus 7 chromosome, complete genomeNUDIX hydrolase4e-23107
NC_013740:15401:317913179132318528Acidaminococcus fermentans DSM 20731, complete genomeNUDIX hydrolase6e-2096.7
NC_009654:4253431:427188342718834272701819Marinomonas sp. MWYL1, complete genomeNAD(+) diphosphatase1e-1995.9
NC_004603:3080614:310703431070343107816783Vibrio parahaemolyticus RIMD 2210633 chromosome I, completeNADH pyrophosphatase3e-1891.3
NC_016641:2225779:224222422422242242724501Paenibacillus terrae HPL-003 chromosome, complete genomeNTP pyrophosphohydrolase4e-1787.4
NC_007681:1007375:100825610082561009041786Methanosphaera stadtmanae DSM 3091, complete genomeNudC5e-1786.7
NC_014632:567289:572739572739573566828Ilyobacter polytropus DSM 2926 chromosome, complete genomeNAD(+) diphosphatase1e-1582
NC_015565:2827444:283094928309492831737789Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeNADH pyrophosphatase8e-1579.7
NC_014387:719245:738820738820739314495Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeNUDIX domain-containing protein1e-1479.3
NC_015311:1612366:163950216395021640278777Prevotella denticola F0289 chromosome, complete genomeNUDIX family hydrolase6e-1476.6
NC_012984:2681548:269025426902542691078825Lactobacillus plantarum JDM1, complete genomepyrophosphatase (putative)1e-1375.9
NC_007759:2179000:220455322045532205386834Syntrophus aciditrophicus SB, complete genomeNTP pyrophosphohydrolase containing a Zn-finger N1e-1375.5
NC_016629:3789554:383169938316993832574876Desulfovibrio africanus str. Walvis Bay chromosome, completeNAD(+) diphosphatase1e-1375.5
NC_014169:515957:5343915343915356831293Bifidobacterium longum subsp. longum JDM301 chromosome, completeNUDIX hydrolase9e-1269.7
NC_004307:1108325:1108325110832511096171293Bifidobacterium longum NCC2705, complete genomehypothetical protein with N-terminal similarity to NADH pyrophosphatase9e-1269.7
NC_015067:459626:4871204871204884121293Bifidobacterium longum subsp. longum JCM 1217, complete genomehypothetical protein7e-1269.7
NC_014656:1161188:1161188116118811624801293Bifidobacterium longum subsp. longum BBMN68 chromosome, completenpy17e-1269.7
NC_017215:1605917:1605917160591716070261110Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,NAD(+) diphosphatase1e-1169.3
NC_012814:1599241:1601283160128316023921110Bifidobacterium animalis subsp. lactis Bl-04, complete genomehypothetical protein1e-1169.3
NC_011593:2288993:2290920229092022922121293Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,NUDIX hydrolase3e-1167.8
NC_008618:1704462:1704462170446217055591098Bifidobacterium adolescentis ATCC 15703, complete genomehypothetical protein7e-1166.6
NC_015677:3339181:335634733563473356889543Ramlibacter tataouinensis TTB310 chromosome, complete genomehypothetical protein4e-0960.5
NC_008268:7180663:720125472012547202180927Rhodococcus sp. RHA1, complete genomeNADH pyrophosphatase2e-0858.2
NC_008781:3365468:336876133687613369294534Polaromonas naphthalenivorans CJ2, complete genomeNUDIX hydrolase2e-0858.2
NC_010551:1462827:147709114770911477627537Burkholderia ambifaria MC40-6 chromosome 1, complete sequenceNUDIX hydrolase6e-0856.6
NC_013406:5066769:5080674508067450816991026Paenibacillus sp. Y412MC10 chromosome, complete genomehypothetical protein7e-0753.1
NC_012778:2049694:205394520539452054898954Eubacterium eligens ATCC 27750, complete genomeNADH pyrophosphatase4e-0650.8
NC_013929:6251989:626037462603746260784411Streptomyces scabiei 87.22 chromosome, complete genomeNUDIX hydrolase4e-0650.8
NC_014171:521996:537570537570538031462Bacillus thuringiensis BMB171 chromosome, complete genomemutator MutT protein6e-0650.1
NC_017208:516127:531376531376531837462Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeMutator mutT protein9e-0649.7