Pre_GI Gene

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Host: NC_014169 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_014169:515957 Bifidobacterium longum subsp. longum JDM301 chromosome, complete

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
515633516436804hypothetical protein
515957516523567transposaseQuickGO ontologyBLASTP
5166545178561203tyrosine recombinase XerDQuickGO ontologyBLASTP
5174035188181416integraserecombinaseQuickGO ontologyBLASTP
5188155198701056phage integrase family proteinQuickGO ontologyBLASTP
519994520275282transposaseQuickGO ontologyBLASTP
520376520492117hypothetical proteinBLASTP
520799521590792FAD linked oxidase domain-containing proteinQuickGO ontology
521587522138552PilT protein domain-containing proteinQuickGO ontology
522389523228840hypothetical protein
523221524009789SMF family proteinQuickGO ontologyBLASTP
526785527219435hypothetical proteinBLASTP
5275265289591434lipopolysaccharide biosynthesisQuickGO ontologyBLASTP
5291575305541398hypothetical proteinBLASTP
531037532020984G5 domain-containing proteinQuickGO ontologyBLASTP
532195532566372thioredoxinQuickGO ontologyBLASTP
532734533396663hypothetical proteinBLASTP
533524534381858alphabeta hydrolase fold proteinQuickGO ontologyBLASTP
5343915356831293NUDIX hydrolaseQuickGO ontologyBLASTP
535709536122414glycine cleavage system H proteinQuickGO ontologyBLASTP
5362405375711332hypothetical proteinBLASTP
5378785401482271oligopeptidase BQuickGO ontologyBLASTP