Pre_GI: BLASTP Hits

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Query: NC_008593:2250871:2250871 Clostridium novyi NT, complete genome

Start: 2250871, End: 2251881, Length: 1011

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009698:120119:1431651431651441691005Clostridium botulinum A str. Hall chromosome, complete genomespore coat protein CotS1e-127456
NC_009697:120117:1431631431631441671005Clostridium botulinum A str. ATCC 19397 chromosome, completespore coat protein CotS1e-127456
NC_010516:127000:1501521501521511561005Clostridium botulinum B1 str. Okra, complete genomespore coat protein CotS2e-127455
NC_008261:2743942:2754056275405627550601005Clostridium perfringens ATCC 13124, complete genomespore coat protein CotS6e-122437
NC_015949:1887478:188833318883331889325993Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomespore coat protein, CotS family6e-56218
NC_010520:121077:1415321415321425451014Clostridium botulinum A3 str. Loch Maree, complete genomeputative spore coat protein1e-37157
NC_012658:125500:1451901451901462031014Clostridium botulinum Ba4 str. 657 chromosome, complete genomeputative spore coat protein2e-37156
NC_017297:122383:142821142821143807987Clostridium botulinum F str. 230613 chromosome, complete genomeCotS family spore coat protein2e-37156
NC_012563:122000:1416841416841426971014Clostridium botulinum A2 str. Kyoto, complete genomespore coat protein, CotS family7e-37154
NC_009699:122000:1425571425571435701014Clostridium botulinum F str. Langeland chromosome, complete genomespore coat protein6e-37154
NC_009495:128000:1477481477481487611014Clostridium botulinum A str. ATCC 3502 chromosome, complete genomespore coat protein6e-37154
NC_009697:120117:1405511405511415641014Clostridium botulinum A str. ATCC 19397 chromosome, completespore coat protein6e-37154
NC_009698:120119:1405531405531415661014Clostridium botulinum A str. Hall chromosome, complete genomespore coat protein6e-37154
NC_010516:127000:1475411475411485541014Clostridium botulinum B1 str. Okra, complete genomeputative spore coat protein1e-36153
NC_008593:2250871:2265569226556922665821014Clostridium novyi NT, complete genomespore coat protein S, putative6e-36151
NC_008261:2743942:2758214275821427592211008Clostridium perfringens ATCC 13124, complete genomeputative spore coat protein1e-34147
NC_010516:127000:1455151455151465251011Clostridium botulinum B1 str. Okra, complete genomeputative spore coat protein4e-34145
NC_009699:122000:1405311405311415411011Clostridium botulinum F str. Langeland chromosome, complete genomespore coat protein3e-33142
NC_017297:122383:1407951407951418051011Clostridium botulinum F str. 230613 chromosome, complete genomeCotS family spore coat protein3e-33142
NC_010520:121077:1395061395061405161011Clostridium botulinum A3 str. Loch Maree, complete genomeputative spore coat protein2e-32139
NC_008593:2250871:226371322637132264684972Clostridium novyi NT, complete genomespore coat protein S, putative2e-31136
NC_012658:125500:1431641431641441741011Clostridium botulinum Ba4 str. 657 chromosome, complete genomeputative spore coat protein3e-31136
NC_009698:120119:1385271385271395371011Clostridium botulinum A str. Hall chromosome, complete genomespore coat protein2e-29130
NC_009697:120117:1385251385251395351011Clostridium botulinum A str. ATCC 19397 chromosome, completespore coat protein2e-29130
NC_009495:128000:1457221457221467321011Clostridium botulinum A str. ATCC 3502 chromosome, complete genomespore coat protein2e-29130
NC_012563:122000:1396581396581406681011Clostridium botulinum A2 str. Kyoto, complete genomespore coat protein, CotS family2e-29130
NC_021182:2667408:2684796268479626858421047Clostridium pasteurianum BC1, complete genomespore coat protein, CotS family3e-27122
NC_008261:2743942:2756479275647927575071029Clostridium perfringens ATCC 13124, complete genomeputative spore coat protein2e-24113
NC_020291:1045058:1066248106624810673121065Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomespore coat protein CotS1e-23110
NC_021182:2219286:2224360222436022254121053Clostridium pasteurianum BC1, complete genomespore coat protein, CotS family4e-23108
NC_014393:1782811:1794836179483617959061071Clostridium cellulovorans 743B chromosome, complete genomespore coat protein, CotS family5e-2098.6
NC_008262:2169262:2185546218554621866251080Clostridium perfringens SM101, complete genomehypothetical protein6e-2098.6
NC_003366:2286083:2302395230239523034741080Clostridium perfringens str. 13, complete genomeprobable spore coat protein2e-1996.7
NC_015949:1887478:1890331189033118913321002Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomespore coat protein, CotS family8e-1891.3
NC_015660:1988000:1989515198951519906091095Geobacillus thermoglucosidasius C56-YS93 chromosome, completespore coat protein, CotS family3e-1272.8
NC_014650:1942935:1951363195136319524571095Geobacillus sp. Y4.1MC1 chromosome, complete genomespore coat protein, CotS family6e-1272
NC_015949:1887478:188937218893721890340969Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomehypothetical protein5e-1065.5