Pre_GI: BLASTP Hits

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Query: NC_008525:606986:609241 Pediococcus pentosaceus ATCC 25745, complete genome

Start: 609241, End: 609441, Length: 201

Host Lineage: Pediococcus pentosaceus; Pediococcus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: Use in fermentation of food products. A distinctive characteristic of pediococci is their ability to form tetrads via cell division in two perpendicular directions in a single plane. Like other lactic acid bacteria, species of Pediococcus are acid tolerant, cannot synthesize porphyrins, and possess a strictly fermentative (homofermentative) facultatively anaerobic metabolism with lactic acid as the major metabolic end product. They also occur in such food products as cured meat, raw sausages, and marinated fish, and are are used for biotechnological processing and preservation of foods. This bacterium can be isolated from a variety of plant materials and bacterial-ripened cheeses. This organism is used as an acid producing starter culture in the fermentation of some sausages, cucumbers, green beans, soy milk, and silage. Some strains have been reported to contain several (3-5) resident plasmids that render the bacterium capable of fermenting some sugars (raffinose, melibiose, and sucrose), as well as producing bacteriocins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014550:3534000:3546279354627935476011323Arthrobacter arilaitensis Re117, complete genomeD-galactonate transporter7e-1579.3
CP002516:613462:6134626134626147961335Escherichia coli KO11, complete genomed-galactonate transporter8e-1165.9
CU928160:3344746:3359815335981533611491335Escherichia coli IAI1 chromosome, complete genomeputative (D)-galactarate transporter8e-1165.9
NC_010473:3354052:3369340336934033706741335Escherichia coli str. K-12 substr. DH10B, complete genomepredicted (D)-galactarate transporter8e-1165.9
NC_009800:3307123:3322193332219333235271335Escherichia coli HS, complete genomegalactarate permease GarP8e-1165.9
CP002185:3475991:3491277349127734926111335Escherichia coli W, complete genomepredicted (D)-galactarate transporter8e-1165.9
NC_009801:3595001:3608450360845036097841335Escherichia coli E24377A, complete genomegalactarate permease GarP8e-1165.9
NC_002695:3994970:4012808401280840141421335Escherichia coli O157:H7 str. Sakai, complete genomeputative transport protein8e-1165.9
CU928145:3608917:3628541362854136298751335Escherichia coli 55989 chromosome, complete genomeputative (D)-galactarate transporter8e-1165.9
NC_010468:613812:6157586157586170921335Escherichia coli ATCC 8739, complete genomed-galactonate transporter8e-1165.9
AC_000091:3258377:3273428327342832747621335Escherichia coli W3110 DNA, complete genomepredicted (D)-galactarate transporter8e-1165.9
NC_000913:3256307:3271595327159532729291335Escherichia coli K12, complete genomepredicted (D)-galactarate transporter8e-1165.9
NC_016902:613462:6134626134626147961335Escherichia coli KO11FL chromosome, complete genomed-galactonate transporter8e-1165.9
NC_013941:3884725:3902450390245039037841335Escherichia coli O55:H7 str. CB9615 chromosome, complete genomegalactarate transporter8e-1165.9
NC_012967:3191319:3206502320650232078361335Escherichia coli B str. REL606 chromosome, complete genomeputative (D)-galactarate transporter8e-1165.9
NC_012947:630757:6327036327036340371335Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completed-galactonate transporter8e-1165.9
NC_012759:3143455:3158743315874331600771335Escherichia coli BW2952 chromosome, complete genomeputative (D)-galactarate transporter8e-1165.9
NC_011741:3344746:3359815335981533611491335Escherichia coli IAI1 chromosome, complete genomeputative (D)-galactarate transporter8e-1165.9
NC_011415:3523364:3541377354137735427111335Escherichia coli SE11 chromosome, complete genomeputative transport protein8e-1165.9
NC_011748:3608917:3628541362854136298751335Escherichia coli 55989, complete genomeputative (D)-galactarate transporter8e-1165.9
NC_011751:3710786:3728513372851337298471335Escherichia coli UMN026 chromosome, complete genomeputative (D)-galactarate transporter9e-1165.5
NC_011750:3768692:3786417378641737877511335Escherichia coli IAI39 chromosome, complete genomeputative (D)-galactarate transporter9e-1165.5
NC_010498:3488513:3503409350340935047431335Escherichia coli SMS-3-5, complete genomegalactarate permease GarP9e-1165.5
NC_017328:3289853:3305130330513033064641335Shigella flexneri 2002017 chromosome, complete genomeputative galactarate transporter2e-1064.7
NC_004337:3249791:3265067326506732664011335Shigella flexneri 2a str. 301, complete genomeputative transport protein2e-1064.7
NC_004741:3240909:3256185325618532575191335Shigella flexneri 2a str. 2457T, complete genomeputative transport protein2e-1064.7
NC_011000:183928:2060272060272073671341Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative glucarate transporter1e-0962
NC_007613:2981829:2996201299620129974891289Shigella boydii Sb227, complete genome1e-0961.6
NC_008390:235155:2521112521112534511341Burkholderia cepacia AMMD chromosome 1, complete sequenced-galactonate transporter3e-0960.8
NC_015556:1188500:1188550118855011898841335Pseudomonas fulva 12-X chromosome, complete genomemajor facilitator superfamily MFS_11e-0858.2
NC_015499:1493500:1493691149369114949831293Thermodesulfobium narugense DSM 14796 chromosome, complete genomemajor facilitator superfamily MFS_14e-0857
NC_014650:1410790:142420014242001424712513Geobacillus sp. Y4.1MC1 chromosome, complete genome5e-0856.6
NC_008258:3224721:3239997323999732412831287Shigella flexneri 5 str. 8401, complete genomeputative transport protein6e-0856.2
NC_017986:1885613:1938056193805619393991344Pseudomonas putida ND6 chromosome, complete genomed-galactonate transporter6e-0856.2
NC_014837:809911:8239668239668252971332Pantoea sp. At-9b chromosome, complete genomemajor facilitator superfamily protein1e-0755.5
NC_009512:5166459:5192093519209351934361344Pseudomonas putida F1, complete genomed-galactonate transporter2e-0754.7
NC_014306:2518996:2538760253876025400731314Erwinia billingiae Eb661, complete genomeD-galactonate transporter2e-0754.3
NC_010498:1094000:1109201110920111104931293Escherichia coli SMS-3-5, complete genomed-galactonate transporter3e-0753.9
NC_011147:3789696:3812955381295538142921338Salmonella enterica subsp. enterica serovar Paratyphi A strMFS family D-galactonate transport protein3e-0753.9
NC_016810:4027170:4050526405052640518631338Salmonella enterica subsp. enterica serovar Typhimurium strd-galactonate transporter3e-0753.9
NC_016856:4019549:4042905404290540442421338Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SD-galactonate transport protein3e-0753.9
NC_016857:4025767:4050527405052740518641338Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74D-galactonate transport protein3e-0753.9
NC_016863:3967156:3990512399051239918491338Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1D-galactonate transport protein3e-0753.9
NC_010102:3955479:3978105397810539794031299Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-0753.9
NC_011205:4038884:4062259406225940635571299Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853d-galactonate transporter3e-0753.9
NC_012125:3941974:3964974396497439663111338Salmonella enterica subsp. enterica serovar Paratyphi C strainMFS family, D-galactonate transport protein3e-0753.9
NC_011294:3880500:3903869390386939051611293Salmonella enterica subsp. enterica serovar Enteritidis strd-galactonate transporter3e-0753.9
NC_016860:4110968:4134324413432441356161293Salmonella enterica subsp. enterica serovar Typhimurium strD-galactonate transporter3e-0753.9
NC_014306:2518996:2523564252356425249311368Erwinia billingiae Eb661, complete genomeMajor facilitator superfamily transporter5e-0753.1
NC_004337:3590323:3880981388098138823181338Shigella flexneri 2a str. 301, complete genomeD-galactonate transport protein1e-0652
NC_007644:469181:4810284810284823531326Moorella thermoacetica ATCC 39073, complete genomeMajor facilitator superfamily MFS_12e-0651.6
NC_015376:662844:6801526801526815101359Burkholderia gladioli BSR3 chromosome chromosome 2, completeD-galactonate transporter2e-0651.2
NC_017167:2647655:2651160265116026524881329Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1major facilitator superfamily protein2e-0651.2
NC_014837:809911:8253718253718266901320Pantoea sp. At-9b chromosome, complete genomemajor facilitator superfamily protein3e-0650.8
NC_017047:3907854:3929122392912239304381317Rahnella aquatilis HX2 chromosome, complete genomemajor facilitator superfamily protein3e-0650.4
NC_015061:3840463:3861708386170838630241317Rahnella sp. Y9602 chromosome, complete genomemajor facilitator superfamily MFS_13e-0650.4
NC_013956:595320:6324416324416337301290Pantoea ananatis LMG 20103 chromosome, complete genomeYjjL5e-0650.1
NC_010676:2720068:2734802273480227361631362Burkholderia phytofirmans PsJN chromosome 2, complete sequencemajor facilitator superfamily MFS_18e-0649.3