Pre_GI Gene

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Host: NC_011147 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011147:3789696 Salmonella enterica subsp. enterica serovar Paratyphi A str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a clinical isolate collected from a child with paratyphoid fever in Karachi, Pakistan, 2004. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
37896963790226531hypothetical proteinBLASTP
37902233790585363hypothetical proteinBLASTP
37905753790922348inner membrane proteinQuickGO ontologyBLASTP
379136537930261662hypothetical proteinBLASTP
37932153793643429heat shock chaperone IbpBQuickGO ontologyBLASTP
37937533794166414heat shock protein IbpAQuickGO ontologyBLASTP
37944733794808336hypothetical proteinBLASTP
379481037960361227ATPGTP-binding proteinQuickGO ontologyBLASTP
37971033797660558thioldisulfide interchange proteinQuickGO ontologyBLASTP
379765737995881932cytochrome c-type biogenesis protein F2QuickGO ontologyBLASTP
37995853800064480cytochrome c-type biogenesis protein CcmEQuickGO ontologyBLASTP
38000613800273213heme exporter protein D1QuickGO ontologyBLASTP
38002703801007738heme exporter protein C1QuickGO ontologyBLASTP
38017153802332618cytochrome c biogenesis protein CcmAQuickGO ontologyBLASTP
380233838037381401cytochrome c peroxidaseQuickGO ontologyBLASTP
38039283804560633chaperone protein TorDQuickGO ontologyBLASTP
380455338071052553trimethylamine-N-oxide reductaseQuickGO ontologyBLASTP
380709538082791185hypothetical proteinBLASTP
38084093809101693DNA-binding transcriptional regulator TorRQuickGO ontologyBLASTP
380907438101141041TMAO reductase system periplasmic protein TorTQuickGO ontologyBLASTP
381019438129292736hybrid sensory histidine kinase TorSQuickGO ontologyBLASTP
381295538142921338MFS family D-galactonate transport proteinQuickGO ontologyBLASTP