Pre_GI: BLASTP Hits

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Query: NC_008525:108687:142598 Pediococcus pentosaceus ATCC 25745, complete genome

Start: 142598, End: 143326, Length: 729

Host Lineage: Pediococcus pentosaceus; Pediococcus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: Use in fermentation of food products. A distinctive characteristic of pediococci is their ability to form tetrads via cell division in two perpendicular directions in a single plane. Like other lactic acid bacteria, species of Pediococcus are acid tolerant, cannot synthesize porphyrins, and possess a strictly fermentative (homofermentative) facultatively anaerobic metabolism with lactic acid as the major metabolic end product. They also occur in such food products as cured meat, raw sausages, and marinated fish, and are are used for biotechnological processing and preservation of foods. This bacterium can be isolated from a variety of plant materials and bacterial-ripened cheeses. This organism is used as an acid producing starter culture in the fermentation of some sausages, cucumbers, green beans, soy milk, and silage. Some strains have been reported to contain several (3-5) resident plasmids that render the bacterium capable of fermenting some sugars (raffinose, melibiose, and sucrose), as well as producing bacteriocins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014554:3164599:317762331776233178360738Lactobacillus plantarum subsp. plantarum ST-III chromosome,transcription regulator2e-62238
NC_012914:970000:9861589861589873871230Paenibacillus sp. JDR-2, complete genometranscriptional regulator, AraC family4e-1168.2
NC_017068:1852708:185696018569601857808849Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative AraC family transcriptional regulator2e-1065.9
NC_019897:3251639:3253455325345532550831629Thermobacillus composti KWC4 chromosome, complete genomeresponse regulator containing CheY-like receiver domain and AraC-type DNA-binding domain2e-0962.4
NC_014622:5553628:557234955723495573242894Paenibacillus polymyxa SC2 chromosome, complete genomeAraC family transcriptional regulator3e-0962.4
NC_010610:2013659:202098620209862021822837Lactobacillus fermentum IFO 3956, complete genometranscriptional regulator4e-0961.6
NC_015389:1858732:1870279187027918714121134Coriobacterium glomerans PW2 chromosome, complete genometranscriptional regulator, AraC family6e-0961.2
NC_010723:3530000:353016335301633530924762Clostridium botulinum E3 str. Alaska E43, complete genomeAraC-family transcriptional regulator7e-0960.8
NC_010723:2082750:209660120966012097335735Clostridium botulinum E3 str. Alaska E43, complete genomeDNA-bindng response regulator, AraC family2e-0859.7
NC_015567:69190:7059670596717741179Serratia sp. AS9 chromosome, complete genomeAraC family transcriptional regulator2e-0859.3
NC_015566:69190:7059670596717741179Serratia sp. AS12 chromosome, complete genomeAraC family transcriptional regulator2e-0859.3
NC_012778:1778654:1778654177865417801981545Eubacterium eligens ATCC 27750, complete genometwo-component system, response regulator YesN3e-0858.9
NC_006905:3780000:3801790380179038029681179Salmonella enterica subsp. enterica serovar Choleraesuis strxylose operon regulatory protein (AraC/XylS family)4e-0858.5
NC_014837:33014:5019650196513741179Pantoea sp. At-9b chromosome, complete genomeAraC family transcriptional regulator4e-0858.5
NC_010674:2185704:220173122017312202468738Clostridium botulinum B str. Eklund 17B, complete genomeDNA-bindng response regulator, AraC family5e-0858.2
NC_014328:1286407:128640712864071287153747Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative response regulator5e-0858.2
NC_015690:1726000:174660117466011747449849Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAraC family transcriptional regulator5e-0858.2
NC_016935:2256000:227664522766452277493849Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator5e-0858.2
NC_015690:1542061:156474015647401565588849Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAraC family transcriptional regulator7e-0857.8
NC_010465:62348:6812668126693191194Yersinia pseudotuberculosis YPIII, complete genometranscriptional regulator, AraC family1e-0757.4
NC_008150:4634695:4643424464342446446171194Yersinia pestis Antiqua, complete genomeputative AraC-family transcriptional regulatory protein1e-0757.4
NC_017160:4508000:4521419452141945226121194Yersinia pestis D182038 chromosome, complete genomeputative AraC-family transcriptional regulator1e-0757.4
NC_009832:110239:1102391102391114171179Serratia proteamaculans 568, complete genometranscriptional regulator, AraC family9e-0857.4
NC_013656:2317224:232196023219602322829870Lactococcus lactis subsp. lactis KF147, complete genomeAraC family transcriptional regulator8e-0857.4
NC_016935:2069562:209206820920682092916849Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator8e-0857.4
NC_014622:3955851:3978024397802439797451722Paenibacillus polymyxa SC2 chromosome, complete genomeABC fe(3+) transporter permease1e-0757
NC_015275:309133:3217793217793240432265Clostridium lentocellum DSM 5427 chromosome, complete genometranscriptional regulator, AraC family1e-0757
NC_005966:1832066:184434818443481845091744Acinetobacter sp. ADP1, complete genomeputative transcriptional regulator (AraC family)2e-0756.6
NC_010001:649000:6655526655526671201569Clostridium phytofermentans ISDg, complete genometwo component transcriptional regulator, AraC family2e-0756.6
NC_016826:1783828:178483917848391785372534Streptococcus infantarius subsp. infantarius CJ18 chromosome,AraC family DNA-binding response regulator1e-0756.6
NC_016935:976059:979903979903980871969Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator3e-0755.8
NC_014538:985339:9853399853399869311593Thermoanaerobacter sp. X513 chromosome, complete genomeAraC family two component transcriptional regulator3e-0755.8
NC_010320:1949852:1967413196741319690051593Thermoanaerobacter sp. X514 chromosome, complete genomeresponse regulator receiver protein3e-0755.8
NC_015690:977131:9771319771319781321002Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAraC family transcriptional regulator2e-0755.8
NC_013132:3877500:390580239058023906800999Chitinophaga pinensis DSM 2588, complete genometranscriptional regulator, AraC family2e-0755.8
NC_012914:469117:494729494729495610882Paenibacillus sp. JDR-2, complete genometranscriptional regulator, AraC family4e-0755.1
NC_015690:2039215:2076853207685320791262274Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAraC family transcriptional regulator4e-0755.1
NC_016935:2567039:2626395262639526286682274Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator4e-0755.1
NC_008800:4488112:4504402450440245055951194Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,AraC family transcriptional regulator4e-0755.1
NC_015224:4426167:4439236443923644404291194Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,AraC family transcriptional regulator4e-0755.1
NC_015428:193817:211001211001211951951Lactobacillus buchneri NRRL B-30929 chromosome, complete genomeAraC family transcriptional regulator6e-0754.7
NC_011757:4293000:4333052433305243341491098Methylobacterium chloromethanicum CM4, complete genometranscriptional regulator, AraC family6e-0754.7
NC_012925:140000:153519153519154355837Streptococcus suis P1/7, complete genomeAraC-family regulatory protein8e-0754.3
NC_012924:142500:153324153324154160837Streptococcus suis SC84, complete genomeAraC family transcriptional regulator8e-0754.3
NC_012926:140000:153303153303154139837Streptococcus suis BM407 chromosome, complete genomeAraC family transcriptional regulator8e-0754.3
NC_009442:142500:153327153327154175849Streptococcus suis 05ZYH33 chromosome, complete genometranscriptional regulator7e-0754.3
NC_009443:142500:153231153231154079849Streptococcus suis 98HAH33, complete genometranscriptional regulator7e-0754.3
NC_011898:1218500:124324112432411244164924Clostridium cellulolyticum H10, complete genometranscriptional regulator, AraC family6e-0754.3
NC_015690:6521740:654375765437576544740984Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAraC family transcriptional regulator1e-0653.9
NC_012691:2050957:205611820561182057017900Tolumonas auensis DSM 9187, complete genometranscriptional regulator, AraC family1e-0653.1
NC_016641:3058571:307417930741793075060882Paenibacillus terrae HPL-003 chromosome, complete genometranscriptional activator ramA2e-0653.1
NC_006905:1766000:177752317775231778380858Salmonella enterica subsp. enterica serovar Choleraesuis strputative bacterial regulatory helix-turn-helix proteins, araC family2e-0652.8
NC_012004:1053682:1068444106844410696071164Streptococcus uberis 0140J, complete genomeAraC family regulatory protein2e-0652.8
NC_011601:2139188:218185521818552182772918Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomepdu/cob regulatory protein2e-0652.8
NC_016935:2302055:231779123177912318684894Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator3e-0652.4
NC_015690:1726000:1733764173376417353621599Paenibacillus mucilaginosus KNP414 chromosome, complete genomeYesN43e-0652.4
NC_016935:2256000:2263967226396722655561590Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein3e-0652.4
NC_012488:1159463:116249011624901163374885Listeria monocytogenes Clip81459, complete genomeregulatory protein3e-0652.4
NC_014840:205723:216162216162217043882Pantoea sp. At-9b plasmid pPAT9B03, complete sequencetranscriptional regulator, AraC family2e-0652.4
NC_014023:24000:378563785638755900Bacillus megaterium QM B1551 plasmid pBM700, complete sequenceAraC-like ligand binding domain/transcriptional regulator, AraC family2e-0652.4
NC_013766:1202713:120444412044441205328885Listeria monocytogenes 08-5578 chromosome, complete genometranscriptional regulator PocR3e-0652
NC_016641:2773757:2773757277375727753491593Paenibacillus terrae HPL-003 chromosome, complete genomeAraC family transcriptional regulator3e-0652
NC_014624:1675500:1736220173622017374221203Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein4e-0652
NC_015164:1952500:197383319738331974720888Bacteroides salanitronis DSM 18170 chromosome, complete genometranscriptional regulator, AraC family4e-0652
NC_007907:960104:1038601103860110399351335Desulfitobacterium hafniense Y51, complete genomehypothetical protein5e-0651.6
NC_013892:3745749:376796637679663768943978Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein4e-0651.6
NC_014976:170683:191099191099191818720Bacillus subtilis BSn5 chromosome, complete genomeputative AraC/XylS family transcriptional regulator4e-0651.6
NC_012470:2021316:2037284203728420384921209Streptococcus equi subsp. zooepidemicus, complete genomeAraC family regulatory protein6e-0651.2
NC_011149:1429523:143788214378821438733852Salmonella enterica subsp. enterica serovar Agona str. SL483,putative regulatory protein6e-0651.2
NC_004631:1623511:163507716350771635928852Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative transcriptional regulator6e-0651.2
NC_003198:1336894:134525413452541346105852Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative transcriptional regulator6e-0651.2
NC_003197:1753663:176439617643961765253858Salmonella typhimurium LT2, complete genomeputative regulatory protein6e-0651.2
NC_009438:236424:238827238827239708882Shewanella putrefaciens CN-32 chromosome, complete genomehelix-turn-helix domain-containing protein6e-0651.2
NC_016860:1752000:176209317620931762944852Salmonella enterica subsp. enterica serovar Typhimurium strputative regulatory protein6e-0651.2
NC_011080:1750000:176075417607541761605852Salmonella enterica subsp. enterica serovar Newport str. SL254,putative regulatory protein6e-0651.2
NC_011898:1880960:189617918961791897009831Clostridium cellulolyticum H10, complete genometranscriptional regulator, AraC family6e-0651.2
NC_011094:1726000:173757617375761738427852Salmonella enterica subsp. enterica serovar Schwarzengrund strregulatory protein6e-0651.2
NC_014624:2668157:271610827161082716983876Eubacterium limosum KIST612 chromosome, complete genometranscriptional regulator9e-0650.8
NC_015690:4361000:442089344208934421756864Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAraC family transcriptional regulator9e-0650.8
NC_013205:2332174:234776623477662348590825Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,transcriptional regulator, AraC family9e-0650.8
NC_016935:4117485:418696441869644187827864Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator9e-0650.8
NC_006511:1273162:128151612815161282367852Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative transcriptional regulator8e-0650.8
NC_011147:1267005:127535912753591276210852Salmonella enterica subsp. enterica serovar Paratyphi A strtranscriptional regulator8e-0650.8
NC_014624:3463272:3467956346795634692181263Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein8e-0650.8
NC_016935:2256000:227476222747622275592831Paenibacillus mucilaginosus 3016 chromosome, complete genomeAraC family transcriptional regulator8e-0650.8
NC_015690:1726000:174471817447181745548831Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAraC family transcriptional regulator9e-0650.4
NC_015379:4426827:4431388443138844324311044Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, AraC family9e-0650.4