Pre_GI Gene

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Host: NC_011898 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011898:1218500 Clostridium cellulolyticum H10, complete genome

Host Lineage: Clostridium cellulolyticum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: A non-ruminal mesophilic cellulolytic bacterium originally isolated from decayed grass compost. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Clostridium cellulolyticum is a mesophilic cellulolytic bacterium. Cellulose-degradation by C. cellulolyticum has been extensively studied. The cellulolytic enzymes of this organism are bound to a protein scaffold in an extracellular multienzyme complex called a cellulosome.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
121853912208782340transcriptional regulator AraC familyQuickGO ontologyBLASTP
12210021221832831transcriptional regulator AraC familyQuickGO ontologyBLASTP
122200312251733171glycoside hydrolase family 2 sugar bindingQuickGO ontologyBLASTP
122584412327046861Carbohydrate-binding family 9QuickGO ontologyBLASTP
123292012347311812putative sensor with HAMP domainQuickGO ontologyBLASTP
123473612363641629two component transcriptional regulator AraC familyQuickGO ontologyBLASTP
123640812377751368extracellular solute-binding protein family 1QuickGO ontologyBLASTP
123768412394771794protein of unknown function DUF1680QuickGO ontologyBLASTP
123992412412791356extracellular solute-binding protein family 1QuickGO ontologyBLASTP
12413661242250885binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
12422601243099840binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP
12432411244164924transcriptional regulator AraC familyQuickGO ontologyBLASTP
124441012458791470glycoside hydrolase family 4QuickGO ontologyBLASTP
12458881246757870transcriptional regulator AraC familyQuickGO ontologyBLASTP
124689512492702376glycoside hydrolase family 31QuickGO ontologyBLASTP
124946112504711011transcriptional regulator LacI familyQuickGO ontologyBLASTP
125062312521341512carbohydrate kinase FGGYQuickGO ontologyBLASTP
125216112532071047Alcohol dehydrogenase GroES domain proteinQuickGO ontologyBLASTP
125322412545401317D-tagatose-bisphosphate aldolase class II accessory protein AgaZQuickGO ontologyBLASTP
125463312556461014aldoketo reductaseQuickGO ontologyBLASTP
12556841256115432RbsD or FucU transportQuickGO ontologyBLASTP
125623012576451416glycoside hydrolase family 43QuickGO ontologyBLASTP
12578361258660825transcriptional regulator AraC familyQuickGO ontologyBLASTP
125884012619413102glycoside hydrolase family 2 TIM barrelQuickGO ontologyBLASTP
12622791263250972binding-protein-dependent transport systems inner membrane componentQuickGO ontologyBLASTP