Pre_GI: BLASTP Hits

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Query: NC_007777:2638580:2668112 Frankia sp. CcI3, complete genome

Start: 2668112, End: 2669722, Length: 1611

Host Lineage: Frankia; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Isolated from root nodules of Casuarina cunninghamiana in 1983 at Harvard Forest in Petersham, Massachusetts, USA. Nitrogen fixation.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014210:4188448:4191569419156941929871419Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,sigma54 specific transcriptional regulator, Fis family6e-109394
NC_015312:681678:6857296857296876391911Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeGAF modulated sigma54 specific Fis family transcriptional regulator3e-32140
NC_014830:335380:3610653610653628341770Intrasporangium calvum DSM 43043 chromosome, complete genomeGAF modulated sigma54 specific transcriptional regulator, Fis family3e-23110
NC_007777:2964500:2982679298267929844421764Frankia sp. CcI3, complete genomediguanylate cyclase (GGDEF domain)9e-23108
NC_008268:7180663:7202221720222172040471827Rhodococcus sp. RHA1, complete genomepossible transcriptional regulator1e-1998.2
NC_007777:2964500:2964579296457929664261848Frankia sp. CcI3, complete genomeputative transcriptional regulator, Fis family1e-1895.1
NC_008271:35909:4751547515493921878Rhodococcus sp. RHA1 plasmid pRHL3, complete sequenceprobable transcriptional regulator3e-1687
NC_013757:1888850:1904409190440919062141806Geodermatophilus obscurus DSM 43160, complete genomeGAF modulated sigma54 specific transcriptional regulator, Fis family3e-1687
NC_010682:288415:3041113041113061742064Ralstonia pickettii 12J chromosome 1, complete sequenceGAF modulated sigma54 specific transcriptional regulator, Fis family6e-1376.3
NC_021171:2697398:2708227270822727102452019Bacillus sp. 1NLA3E, complete genometranscriptional activator of acetoin/glycerol metabolism9e-1375.5
NC_008593:2020473:2034360203436020363391980Clostridium novyi NT, complete genomeaco operon expression regulatory protein1e-1171.6
NC_010674:658596:6637586637586657131956Clostridium botulinum B str. Eklund 17B, complete genomeaco operon expression regulatory protein2e-1171.2
NC_016943:1314500:1339114133911413409191806Blastococcus saxobsidens DD2, complete genomeputative Fis family transcriptional regulator2e-1171.2
NC_009937:3324793:3342477334247733444201944Azorhizobium caulinodans ORS 571, complete genomesigma54 specific transcriptional regulator2e-1170.9
NC_010723:622928:6289516289516309061956Clostridium botulinum E3 str. Alaska E43, complete genomesignal-transduction and transcriptional-control protein3e-1170.5
NC_009142:2565561:2580921258092125822731353Saccharopolyspora erythraea NRRL 2338, complete genometranscriptional regulator4e-1170.1
NC_010516:2064027:2071399207139920732941896Clostridium botulinum B1 str. Okra, complete genomeaor transcriptional regulator8e-1169.3
NC_009699:2116500:2121467212146721233621896Clostridium botulinum F str. Langeland chromosome, complete genomeaor transcriptional regulator8e-1169.3
NC_012563:2203037:2209814220981422117091896Clostridium botulinum A2 str. Kyoto, complete genomeaor transcriptional regulator7e-1169.3
NC_009495:2056546:2063323206332320652181896Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeaor transcriptional regulator7e-1169.3
NC_009697:1985187:1991964199196419938591896Clostridium botulinum A str. ATCC 19397 chromosome, completeaor transcriptional regulator7e-1169.3
NC_009698:1985404:1992181199218119940761896Clostridium botulinum A str. Hall chromosome, complete genomeaor transcriptional regulator7e-1169.3
NC_017297:2114222:2122424212242421234641041Clostridium botulinum F str. 230613 chromosome, complete genome1e-1068.6
NC_010520:2171584:2180905218090521828001896Clostridium botulinum A3 str. Loch Maree, complete genomeaor transcriptional regulator1e-1068.2
NC_011296:102650:1258441258441272111368Thermodesulfovibrio yellowstonii DSM 11347, complete genomeacetoacetate metabolism regulatory protein AtoC2e-1067.4
NC_014098:1114076:1123982112398211259551974Bacillus tusciae DSM 2912 chromosome, complete genomeGAF modulated sigma54 specific transcriptional regulator, Fis family5e-1066.6
NC_015573:2900906:2926688292668829286701983Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeGAF modulated Fis family sigma54 specific transcriptional regulator5e-1066.6
NC_021184:2936244:2960665296066529626471983Desulfotomaculum gibsoniae DSM 7213, complete genometranscriptional activator of acetoin/glycerol metabolism9e-1065.5
NC_014098:1114076:1133359113335911352541896Bacillus tusciae DSM 2912 chromosome, complete genomeGAF modulated sigma54 specific transcriptional regulator, Fis family2e-0964.7
NC_015425:2389400:2409757240975724116521896Clostridium botulinum BKT015925 chromosome, complete genomesensory box sigma-54 dependent transcriptional regulator2e-0964.3
UCMB5137:409500:4323014323014341121812Bacillus atrophaeus UCMB-5137transcriptional regulator5e-0963.2
NC_017191:754453:7776957776957795031809Bacillus amyloliquefaciens XH7 chromosome, complete genometranscriptional regulator7e-0962.8
NC_017190:794820:8180628180628198701809Bacillus amyloliquefaciens LL3 chromosome, complete genometranscriptional activator of the acoA-acoB-acoC-acoL operon7e-0962.8
NC_017188:753039:7762817762817780891809Bacillus amyloliquefaciens TA208 chromosome, complete genometranscriptional activator of the acoA-acoB-acoC-acoL operon7e-0962.8
NC_014551:809025:8322718322718340791809Bacillus amyloliquefaciens DSM 7, complete genometranscriptional activator of the ''acoA-acoB-acoC-acoL'' operon7e-0962.8
NC_021184:3841172:3871315387131538733152001Desulfotomaculum gibsoniae DSM 7213, complete genometranscriptional activator of acetoin/glycerol metabolism8e-0962.4
NC_008593:2136759:2153232215323221551271896Clostridium novyi NT, complete genomeSignal-transduction and transcriptional-control protein1e-0862
NC_016584:3040887:3058001305800130601242124Desulfosporosinus orientis DSM 765 chromosome, complete genometranscriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains1e-0862
NC_014377:2033781:2044106204410620460701965Thermosediminibacter oceani DSM 16646 chromosome, complete genomeGAF modulated sigma54 specific transcriptional regulator, Fis family3e-0860.8
NC_014328:2643588:2646788264678826487161929Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative sigma-54-interacting transcriptional regulator3e-0860.5
NC_011830:633195:6453066453066473692064Desulfitobacterium hafniense DCB-2, complete genomesigma54 specific transcriptional regulator, Fis family7e-0859.3
NC_018870:115982:1286931286931308042112Thermacetogenium phaeum DSM 12270 chromosome, complete genomesigma54 specific transcriptional regulator8e-0859.3
NC_011979:1683964:1687718168771816890821365Geobacter sp. FRC-32, complete genometwo component, sigma54 specific, transcriptional regulator, Fis family9e-0858.9
NC_008782:1917634:1920037192003719220402004Acidovorax sp. JS42, complete genomeGAF modulated sigma54 specific transcriptional regulator, Fis family1e-0758.5
NC_018870:1953748:1969744196974419717622019Thermacetogenium phaeum DSM 12270 chromosome, complete genomesigma54 specific transcriptional regulator1e-0758.5
NC_012792:962292:9848279848279869532127Variovorax paradoxus S110 chromosome 2, complete genomeGAF modulated sigma54 specific transcriptional regulator, Fis family2e-0758.2
NC_009832:2596344:2612844261284426148021959Serratia proteamaculans 568, complete genomePAS modulated sigma54 specific transcriptional regulator, Fis family2e-0758.2
NC_014034:1418681:1435179143517914369721794Rhodobacter capsulatus SB1003 chromosome, complete genomeGAF modulated sigma54 specific transcriptional regulator, Fis family2e-0757.8
NC_014328:2643588:2659027265902726609251899Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative sigma-54-interacting transcriptional regulator3e-0757.4
NC_007508:237771:2728612728612742041344Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomesigma 54-dependent response regulator3e-0757
NC_008095:8698766:8721562872156287229951434Myxococcus xanthus DK 1622, complete genomesigma-54 dependent DNA-binding response regulator4e-0757
NC_012668:1688500:1688543168854316903061764Vibrio cholerae MJ-1236 chromosome 1, complete sequencesigma-54 dependent transcriptional regulator4e-0757
NC_013960:841181:8550258550258563621338Nitrosococcus halophilus Nc4 chromosome, complete genomesigma-54 factor interaction domain-containing protein4e-0756.6
NC_017270:1755552:1793339179333917950991761Vibrio cholerae LMA3984-4 chromosome chromosome I, completeSigma-54 dependent transcriptional regulator5e-0756.6
NC_011761:1499500:1506248150624815080771830Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completesigma-54 dependent transcriptional regulator5e-0756.6
NC_007503:1383255:1383255138325513854532199Carboxydothermus hydrogenoformans Z-2901, complete genomesigma-54 dependent transcriptional regulator6e-0756.2
NC_015422:3513689:3560112356011235620941983Alicycliphilus denitrificans K601 chromosome, complete genomeGAF modulated sigma54 specific transcriptional regulator9e-0755.5
NC_016584:4478200:4494340449434044963011962Desulfosporosinus orientis DSM 765 chromosome, complete genometranscriptional activator of acetoin/glycerol metabolism1e-0655.5
NC_008826:539835:5619935619935639871995Methylibium petroleiphilum PM1 plasmid RPME01, complete sequencesigma-54 dependent transcriptional activator1e-0655.5
NC_014220:2102000:2114839211483921167971959Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomePAS modulated sigma54 specific transcriptional regulator, Fis family1e-0655.1
NC_015711:570910:5960145960145974231410Myxococcus fulvus HW-1 chromosome, complete genomesigma-54 dependent DNA-binding response regulator SasR1e-0655.1
NC_013730:5538323:5557446555744655588161371Spirosoma linguale DSM 74, complete genometwo component, sigma54 specific, transcriptional regulator, Fis family2e-0654.7
NC_015633:2565753:2605779260577926071131335Vibrio anguillarum 775 chromosome chromosome I, complete sequenceSigma54-dependent transcriptional activator2e-0654.7
NC_016845:4077293:4099713409971341015001788Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative Fis-type transcriptional regulator3e-0654.3
NC_014931:6203872:6228445622844562297071263Variovorax paradoxus EPS chromosome, complete genometranscriptional regulator, Fis family2e-0654.3
NC_015567:1206727:1235671123567112370081338Serratia sp. AS9 chromosome, complete genometwo component, sigma54 specific, Fis family transcriptional regulator3e-0653.9
NC_015566:1206500:1235486123548612368231338Serratia sp. AS12 chromosome, complete genometwo component, sigma54 specific, Fis family transcriptional regulator3e-0653.9
NC_012489:209016:2363592363592376151257Gemmatimonas aurantiaca T-27, complete genomeFis family transcriptional regulator4e-0653.5
NC_008095:1428665:1456721145672114581541434Myxococcus xanthus DK 1622, complete genomesigma-54 dependent DNA-binding response regulator SasR4e-0653.5
NC_017986:3283433:3305354330535433074142061Pseudomonas putida ND6 chromosome, complete genomeGAF modulated sigma54 specific transcriptional regulator, Fis family4e-0653.5
NC_018870:115982:1656631656631676181956Thermacetogenium phaeum DSM 12270 chromosome, complete genomesigma54 specific transcriptional regulator5e-0653.1
NC_012918:2277500:2300001230000123013741374Geobacter sp. M21 chromosome, complete genomeFis family transcriptional regulator7e-0652.8
NC_015379:2751342:2757021275702127590121992Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative transcription factor, Fis family8e-0652.4