Pre_GI: BLASTP Hits

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Query: NC_007347:1239982:1261662 Ralstonia eutropha JMP134 chromosome 1, complete sequence

Start: 1261662, End: 1262228, Length: 567

Host Lineage: Cupriavidus pinatubonensis; Cupriavidus; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism is found in both soil and water and has great potential for use in bioremediation as it is capable of degrading a large list of pollutants including chlorinated aromatic compounds. The bacterium can utilize hydrogen, carbon dioxide, as well as organic compounds for growth and is a model organism for hydrogen oxidation as it can grow on hydrogen as the sole energy source. It was originally isolated due to its ability to degrade the herbicide 2,4-dichlorophenoxyacetic acid, which is due to the degradative functions being encoded on a plasmid (pJP4). Metabolically versatile bacterium. Cupriavidus necator also known as Ralstonia eutropha is a soil bacterium with diverse metabolic abilities. Strains of this organism are resistant to high levels of copper or are able to degrade chloroaromatic compounds such as halobenzoates and nitrophenols making them useful for bioremediation.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011884:2584791:260420626042062604679474Cyanothece sp. PCC 7425, complete genomePEBP family protein9e-48189
NC_010162:7620000:763660376366037637082480Sorangium cellulosum 'So ce 56', complete genomehypothetical protein9e-44176
NC_013959:2801557:282341728234172823893477Sideroxydans lithotrophicus ES-1 chromosome, complete genomePEBP family protein1e-41169
NC_007517:1107408:112365711236571124187531Geobacter metallireducens GS-15, complete genomeYbhB and YbcL1e-32139
NC_000117:845141:849067849067849519453Chlamydia trachomatis D/UW-3/CX, complete genomehypothetical protein1e-27122
NC_000916:191561:209246209246209701456Methanothermobacter thermautotrophicus str. Delta H, completehypothetical protein1e-26119
NC_007355:3580100:359783135978313598415585Methanosarcina barkeri str. fusaro chromosome 1, complete sequencehypothetical protein3e-26118
NC_015574:1845000:185881718588171859275459Methanobacterium sp. SWAN-1 chromosome, complete genomeYbhB YbcL family protein2e-24112
NC_013741:27353:452354523545756522Archaeoglobus profundus DSM 5631, complete genomePEBP family protein3e-24111
NC_020389:2439067:243906724390672439660594Methanosarcina mazei Tuc01, complete genomePhospholipid-binding protein1e-22106
NC_019892:5171629:518949251894925189965474Singulisphaera acidiphila DSM 18658 chromosome, complete genomeRaf kinase inhibitor-like protein, YbhB/YbcL family9e-23106
NC_019964:930966:935656935656936153498Halovivax ruber XH-70, complete genomeRaf kinase inhibitor-like protein, YbhB/YbcL family5e-22103
NC_011961:891815:892614892614893204591Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequencehypothetical protein2e-1892
NC_014118:1559770:157122815712281571800573Burkholderia sp. CCGE1002 chromosome chromosome 2, completePEBP family protein9e-1889.7
NC_008391:699222:710842710842711414573Burkholderia cepacia AMMD chromosome 2, complete sequenceYbhB and YbcL2e-1685.5
NC_007963:2644930:265125926512592651735477Chromohalobacter salexigens DSM 3043, complete genomeYbhB and YbcL1e-1583.2
NC_016645:245000:246722246722247273552Pyrobaculum sp. 1860 chromosome, complete genomehypothetical protein3e-1581.6
NC_014830:532122:533799533799534236438Intrasporangium calvum DSM 43043 chromosome, complete genomePEBP family protein3e-1581.3
NC_021184:4524500:4537481453748145389081428Desulfotomaculum gibsoniae DSM 7213, complete genomeRaf kinase inhibitor-like protein, YbhB/YbcL family4e-1581.3
NC_011094:1127983:113107811310781131626549Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein1e-1273.2
NC_011083:1173802:117689711768971177445549Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein9e-1373.2
NC_011294:1048223:105002410500241050572549Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein9e-1373.2
NC_012125:2687980:270254627025462703094549Salmonella enterica subsp. enterica serovar Paratyphi C strainouter membrane protein9e-1373.2
NC_011149:1035990:104172810417281042276549Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein9e-1373.2
NC_011205:1147556:115065111506511151199549Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein2e-1272.4
NC_010102:2020762:203531720353172035865549Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-1272.4
AC_000091:558920:570116570116570667552Escherichia coli W3110 DNA, complete genomepredicted kinase inhibitor2e-1272
NC_010473:498252:509448509448509999552Escherichia coli str. K-12 substr. DH10B, complete genomeDLP12 prophage; predicted kinase inhibitor2e-1272
NC_000913:558920:570116570116570667552Escherichia coli K12, complete genomeDLP12 prophage; predicted kinase inhibitor2e-1272
NC_012759:461680:472876472876473427552Escherichia coli BW2952 chromosome, complete genomeputative kinase inhibitor2e-1272
NC_012947:3231893:324234532423453242896552Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completekinase inhibitor2e-1272
NC_012967:531000:542783542783543334552Escherichia coli B str. REL606 chromosome, complete genomeputative kinase inhibitor2e-1272
NC_012559:2353236:237554523755452376099555Laribacter hongkongensis HLHK9, complete genomeputative phospholipid-binding protein3e-1271.6
NC_011274:1057887:105931310593131059861549Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein3e-1271.6
NC_007912:1924392:194016219401621940734573Saccharophagus degradans 2-40, complete genomephospholipid-binding protein2e-1271.6
NC_016831:1950650:196521419652141965762549Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein4e-1271.2
NC_013008:2910567:292261229226122923163552Escherichia coli O157:H7 str. TW14359 chromosome, complete genomekinase inhibitor5e-1270.9
NC_013941:699286:710239710239710790552Escherichia coli O55:H7 str. CB9615 chromosome, complete genomephosphatidylethanolamine-binding protein5e-1270.9
NC_003197:1170746:117217211721721172720549Salmonella typhimurium LT2, complete genomeputative outer membrane protein5e-1270.9
NC_016810:1126693:112849411284941129042549Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein5e-1270.9
NC_016856:1128715:113051611305161131064549Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative outer membrane protein5e-1270.9
NC_016857:1126693:112849411284941129042549Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative outer membrane protein5e-1270.9
NC_016860:1168431:116985711698571170405549Salmonella enterica subsp. enterica serovar Typhimurium strputative outer membrane protein5e-1270.9
NC_016863:1128381:112980711298071130355549Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative outer membrane protein5e-1270.9
NC_017046:1127325:112878411287841129299516Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein7e-1270.5
NC_018750:1591895:160247616024761603015540Streptomyces venezuelae ATCC 10712, complete genomePhospholipid-binding protein2e-1168.9
NC_013517:4208939:426000842600084260550543Sebaldella termitidis ATCC 33386, complete genomePEBP family protein6e-1167.4
NC_012779:2424967:244479824447982445349552Edwardsiella ictaluri 93-146, complete genomehypothetical protein6e-1167.4
NC_007645:2922190:292293329229332923412480Hahella chejuensis KCTC 2396, complete genomePhospholipid-binding protein7e-1167
NC_013508:2356865:238442323844232384974552Edwardsiella tarda EIB202, complete genomeDLP12 prophage; predicted kinase inhibitor8e-1166.6
NC_002944:1781905:179280517928051793425621Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein9e-1166.6
NC_016514:1627664:162903016290301629587558Enterobacter cloacae EcWSU1 chromosome, complete genomeprotein YbcL2e-1065.9
NC_008686:1383891:141573814157381416283546Paracoccus denitrificans PD1222 chromosome 1, complete sequencePEBP family protein2e-1065.9
NC_013592:1056500:106081310608131061394582Dickeya dadantii Ech586, complete genomePEBP family protein4e-1064.3
NC_014215:492855:512935512935513399465Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,Phosphatidylethanolamine-binding protein3e-0961.6
NC_009664:570768:587546587546588061516Kineococcus radiotolerans SRS30216, complete genomePEBP family protein3e-0961.6
NC_010334:1561691:156511715651171565644528Shewanella halifaxensis HAW-EB4, complete genomePEBP family protein4e-0961.2
NC_009901:1516340:151984615198461520373528Shewanella pealeana ATCC 700345, complete genomePEBP family protein3e-0961.2
NC_008146:3349415:335388133538813354417537Mycobacterium sp. MCS, complete genomeYbhB and YbcL8e-0960.1
NC_008705:3377697:338216333821633382699537Mycobacterium sp. KMS, complete genomePEBP family protein8e-0960.1
NC_009077:3323291:332775733277573328293537Mycobacterium sp. JLS, complete genomePEBP family protein8e-0960.1
NC_011601:756885:771868771868772344477Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomekinase inhibitor protein1e-0756.6
NC_016785:1193471:122626812262681226825558Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomehypothetical protein8e-0856.6
NC_016799:1268706:130150013015001302057558Corynebacterium diphtheriae 31A chromosome, complete genomehypothetical protein8e-0856.6
NC_016800:1243000:127461612746161275173558Corynebacterium diphtheriae BH8 chromosome, complete genomehypothetical protein8e-0856.6
NC_013941:1014386:102682910268291027305477Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein1e-0755.8
NC_013008:918215:934757934757935233477Escherichia coli O157:H7 str. TW14359 chromosome, complete genomekinase inhibitor protein1e-0755.8
NC_011353:921500:933164933164933640477Escherichia coli O157:H7 str. EC4115 chromosome, complete genomekinase inhibitor protein1e-0755.8
NC_002695:917509:929799929799930275477Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-0755.8
NC_002655:919654:931451931451931927477Escherichia coli O157:H7 EDL933, complete genomehypothetical protein1e-0755.8
NC_016801:1255611:129127912912791291836558Corynebacterium diphtheriae C7 (beta) chromosome, complete genomehypothetical protein2e-0755.5
NC_012967:786534:800059800059800535477Escherichia coli B str. REL606 chromosome, complete genomeputative kinase inhibitor protein2e-0755.5
NC_015434:6508500:651538865153886515921534Verrucosispora maris AB-18-032 chromosome, complete genomePEBP family protein2e-0755.5
AP010958:867869:881393881393881869477Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted kinase inhibitor2e-0755.5
NC_013353:867869:881393881393881869477Escherichia coli O103:H2 str. 12009, complete genomekinase inhibitor2e-0755.5
NC_002935:1237585:127245212724521272991540Corynebacterium diphtheriae NCTC 13129, complete genomehypothetical protein5e-0754.3
NC_016782:1227246:124621612462161246773558Corynebacterium diphtheriae 241 chromosome, complete genomehypothetical protein4e-0754.3
NC_016787:1207488:123564112356411236198558Corynebacterium diphtheriae HC03 chromosome, complete genomehypothetical protein4e-0754.3
NC_016788:1214026:124562812456281246185558Corynebacterium diphtheriae HC04 chromosome, complete genomehypothetical protein4e-0754.3
NC_016790:1177349:121301812130181213575558Corynebacterium diphtheriae VA01 chromosome, complete genomehypothetical protein4e-0754.3
NC_004129:195347:210070210070210630561Pseudomonas fluorescens Pf-5, complete genomeconserved hypothetical protein TIGR00481, putative7e-0753.9
NC_014121:4043198:406973640697364070212477Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein1e-0652.8
NC_015381:3457784:350546335054633505966504Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein5e-0650.8
NC_015957:8845274:8866898886689888698762979Streptomyces violaceusniger Tu 4113 chromosome, complete genomecarbohydrate binding family 69e-0650.1