Pre_GI: BLASTP Hits

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Query: NC_006177:2398482:2421906 Symbiobacterium thermophilum IAM 14863, complete genome

Start: 2421906, End: 2422553, Length: 648

Host Lineage: Symbiobacterium thermophilum; Symbiobacterium; Shewanellaceae; Clostridiales; Firmicutes; Bacteria

General Information: This symbiotic and thermophilic bacterium was discovered by screening for thermostable tryptanophases in Japanese compost. Cultured growth of this organism requires the presence of another bacterial species, such as a Bacillus or Escherichia coli, which provides diffusable metabolites required for its growth. Pure cultures can be obtained by growing Symbiobacterium thermophilum in a bioreactor, separated from its symbiotic counterpart by a dialysis membrane. Because of its symbiotic nature, it cannot be cultured with conventional methods. Despite a negative reaction for gram stain, this species is placed with the gram-positive bacteria based on 16s phylogenetic analysis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014831:866614:875390875390876166777Thermaerobacter marianensis DSM 12885 chromosome, complete genometranscriptional regulator, TetR family1e-21102
NC_006177:1060428:107883110788311079454624Symbiobacterium thermophilum IAM 14863, complete genomeTetR family transcriptional regulator1e-1377
NC_012912:2426520:243471224347122435335624Dickeya zeae Ech1591, complete genometranscriptional regulator, TetR family3e-1375.1
NC_008825:1113060:111747611174761118156681Methylibium petroleiphilum PM1, complete genomeputative transcription regulator protein4e-1374.7
NC_015682:205900:213249213249213854606Thermodesulfobacterium sp. OPB45 chromosome, complete genomeTetR family transcriptional regulator1e-1273.6
NC_015563:3203012:321023432102343210932699Delftia sp. Cs1-4 chromosome, complete genomeTetR family transcriptional regulator2e-1272.8
NC_012691:2614603:268837726883772689009633Tolumonas auensis DSM 9187, complete genometranscriptional regulator, TetR family4e-1271.2
NC_014500:2402881:242317224231722423798627Dickeya dadantii 3937 chromosome, complete genomeputative DNA-binding transcriptional regulatory family of the TetR family1e-1170.1
NC_011894:6888562:689151368915136892166654Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, TetR family2e-1169.7
NC_015422:3366500:336988733698873370549663Alicycliphilus denitrificans K601 chromosome, complete genomeTetR family transcriptional regulator9e-1167
NC_009637:1421885:142340014234001423993594Methanococcus maripaludis C7 chromosome, complete genomeTetR family transcriptional regulator1e-1066.2
NC_009634:299327:323157323157323735579Methanococcus vannielii SB chromosome, complete genomeTetR family transcriptional regulator1e-1066.2
NC_009464:931647:953666953666954247582Uncultured methanogenic archaeon RC-I, complete genometranscription regulator (TetR family)1e-1066.2
NC_018515:4474000:447872144787214479305585Desulfosporosinus meridiei DSM 13257 chromosome, complete genometranscriptional regulator2e-1066.2
NC_005126:2063667:208044220804422081116675Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein3e-1065.1
NC_013799:1117750:112189411218941122469576Hydrogenobacter thermophilus TK-6, complete genometranscriptional regulator, TetR family3e-1065.1
NC_016818:1795576:183812718381271838744618Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completetranscriptional regulator3e-1065.1
NC_017161:1117741:112188511218851122460576Hydrogenobacter thermophilus TK-6 chromosome, complete genomeTetR family transcriptional regulator3e-1065.1
NC_013501:990022:996731996731997432702Rhodothermus marinus DSM 4252, complete genometranscriptional regulator, TetR family3e-1065.1
NC_013209:2759160:277140327714032772044642Acetobacter pasteurianus IFO 3283-01, complete genometranscriptional regulator TetR4e-1064.7
NC_013205:19295:294872948730161675Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,transcriptional regulator, TetR family1e-0963.2
NC_013385:1064188:107194410719441072534591Ammonifex degensii KC4, complete genometranscriptional regulator, TetR family1e-0962.8
NC_010694:1966676:196889219688921969524633Erwinia tasmaniensis, complete genomeTetR-family transcriptional regulator2e-0962.8
NC_012489:3503632:352462035246203525225606Gemmatimonas aurantiaca T-27, complete genomeTetR family transcriptional regulator2e-0962.4
NC_003296:1461538:146352614635261464227702Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePUTATIVE TRANSCRIPTION REGULATOR PROTEIN2e-0962.4
NC_020409:393329:431903431903432490588Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeTranscriptional regulator, TetR family4e-0961.6
NC_007953:314872:334745334745335404660Burkholderia xenovorans LB400 chromosome 3, complete sequenceTranscriptional regulator, TetR family7e-0960.8
NC_011969:4235818:424498242449824245569588Bacillus cereus Q1 chromosome, complete genometranscriptional regulator9e-0960.5
NC_005957:4311679:432219943221994322786588Bacillus thuringiensis serovar konkukian str. 97-27, completetranscriptional regulator9e-0960.5
NC_011658:4301633:431215343121534312740588Bacillus cereus AH187 chromosome, complete genomeTetR family transcriptional regulator9e-0960.5
NC_010511:7024412:702935870293587030014657Methylobacterium sp. 4-46 chromosome, complete genomeTetR family transcriptional regulator1e-0860.1
NC_014666:8016066:802999880299988030690693Frankia sp. EuI1c chromosome, complete genometranscriptional regulator, TetR family1e-0860.1
NC_016027:1647110:165207416520741652781708Gluconacetobacter xylinus NBRC 3288, complete genometranscriptional regulator1e-0859.7
NC_011899:1437981:145036314503631450923561Halothermothrix orenii H 168, complete genometranscriptional regulator, TetR family1e-0859.7
NC_014758:579741:595465595465596052588Calditerrivibrio nitroreducens DSM 19672 chromosome, completetranscriptional regulator, tetr family2e-0858.9
NC_011296:102650:118358118358118936579Thermodesulfovibrio yellowstonii DSM 11347, complete genometranscriptional regulator, TetR family2e-0858.9
NC_014408:1314382:133323313332331333886654Methanothermobacter marburgensis str. Marburg chromosome, completetranscriptional regulator2e-0858.9
NC_000916:952663:968930968930969556627Methanothermobacter thermautotrophicus str. Delta H, completetranscriptional regulator related protein4e-0858.5
NC_002937:1764117:176817617681761768745570Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completetranscriptional regulator, TetR family7e-0857.4
NC_010572:33724:520805208052712633Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative TetR-family transcriptional regulator7e-0857.4
NC_015500:2866027:287133328713332871929597Treponema brennaborense DSM 12168 chromosome, complete genomeregulatory protein TetR9e-0857
NC_019896:3311000:333368833336883334557870Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeHTH-type transcriptional regulator YerO9e-0857
NC_020244:747762:747762747762748610849Bacillus subtilis XF-1, complete genomeputative transcriptional regulator9e-0857
NC_008750:2332000:235360923536092354196588Shewanella sp. W3-18-1, complete genometranscriptional regulator, TetR family1e-0756.6
NC_009668:1591290:159361715936171594213597Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceTetR family transcriptional regulator1e-0756.6
NC_014834:2264108:229729222972922298074783Rhodopseudomonas palustris DX-1 chromosome, complete genomeTetR family transcriptional regulator1e-0756.6
NC_013510:5499447:554217355421735542841669Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, TetR family1e-0756.6
NC_020272:3245834:326538932653893266237849Bacillus amyloliquefaciens IT-45, complete genomeHTH-type transcriptional regulator YerO2e-0756.2
NC_013173:1671288:167128816712881671860573Desulfomicrobium baculatum DSM 4028, complete genometranscriptional regulator, TetR family2e-0756.2
NC_007951:3631772:364493036449303645616687Burkholderia xenovorans LB400 chromosome 1, complete sequenceTranscriptional regulator, TetR family2e-0756.2
NC_009725:692237:692237692237693085849Bacillus amyloliquefaciens FZB42, complete genomeYerO1e-0756.2
NC_007794:1504449:151167815116781512337660Novosphingobium aromaticivorans DSM 12444, complete genometranscriptional regulator, TetR family1e-0756.2
NC_013859:9500:9513951310355843Azospirillum sp. B510 plasmid pAB510e, complete sequencetranscriptional regulator1e-0756.2
NC_006361:498305:504157504157504795639Nocardia farcinica IFM 10152, complete genomeputative transcriptional regulator2e-0755.8
NC_014824:263491:278808278808279428621Ruminococcus albus 7 plasmid pRUMAL01, complete sequencetranscriptional regulator, TetR family3e-0755.5
NC_007384:1086025:111171911117191112357639Shigella sonnei Ss046, complete genomeputative tet operon regulator3e-0755.5
NC_013939:1927424:193303319330331933656624Deferribacter desulfuricans SSM1, complete genomeTetR family transcriptional regulator3e-0755.5
NC_016048:751000:778797778797779396600Oscillibacter valericigenes Sjm18-20, complete genomeputative TetR family transcriptional regulator3e-0755.5
UCMB5137:1594000:160367516036751604283609Bacillus atrophaeus UCMB-5137transcriptional regulator, TetR family protein3e-0755.5
NC_011740:1189455:119515711951571195795639Escherichia fergusonii ATCC 35469, complete genomeDNA-binding transcriptional regulator of the alternative pyrimidine degradation pathway4e-0755.1
NC_015565:431273:436029436029436604576Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeTetR family transcriptional regulator4e-0755.1
NC_016002:2453919:247043024704302471047618Pseudogulbenkiania sp. NH8B, complete genomeTetR family transcriptional regulator4e-0755.1
NC_011663:1627220:163153716315371632163627Shewanella baltica OS223 chromosome, complete genomeTetR family transcriptional regulator4e-0755.1
NC_014551:691594:691594691594692448855Bacillus amyloliquefaciens DSM 7, complete genometranscriptional regulator (TetR/AcrR family)3e-0755.1
NC_015500:1204501:121396412139641214560597Treponema brennaborense DSM 12168 chromosome, complete genometranscriptional regulator, TetR family3e-0755.1
NC_009706:238160:243295243295243891597Clostridium kluyveri DSM 555 chromosome, complete genometranscriptional regulator3e-0755.1
NC_011837:238160:243295243295243891597Clostridium kluyveri NBRC 12016, complete genomehypothetical protein3e-0755.1
NC_011296:1542835:154922215492221549848627Thermodesulfovibrio yellowstonii DSM 11347, complete genometranscriptional regulator, TetR family3e-0755.1
NC_013385:1882549:191438119143811914974594Ammonifex degensii KC4, complete genometranscriptional regulator, TetR family5e-0754.7
NC_014479:700281:700281700281701126846Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeputative TetR/AcrR family transcriptional regulator5e-0754.7
NC_014335:2274774:227990022799002280316417Bacillus cereus biovar anthracis str. CI chromosome, completeTetR family transcriptional regulator5e-0754.7
NC_008595:1951887:196673919667391967332594Mycobacterium avium 104, complete genomeTetR-family protein transcriptional regulator4e-0754.7
NC_014541:2978500:299438229943822994996615Ferrimonas balearica DSM 9799 chromosome, complete genometranscriptional regulator, TetR family6e-0754.3
NC_006511:1770000:179117817911781791816639Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative transcriptional regulator6e-0754.3
NC_011147:1763681:178636117863611786999639Salmonella enterica subsp. enterica serovar Paratyphi A strtranscriptional regulator6e-0754.3
NC_011000:1262324:126468212646821265407726Burkholderia cenocepacia J2315 chromosome 1, complete sequenceTetR family regulatory protein6e-0754.3
NC_008600:2353696:236310023631002363594495Bacillus thuringiensis str. Al Hakam, complete genometranscriptional regulator, TetR family6e-0754.3
NC_021171:608315:629304629304629975672Bacillus sp. 1NLA3E, complete genomeTetR family transcriptional regulator5e-0754.3
NC_010815:40357:575715757158143573Geobacter lovleyi SZ plasmid pGLOV01, complete sequencetranscriptional regulator, TetR family9e-0753.9
NC_017904:666285:687756687756688415660Mycobacterium sp. MOTT36Y chromosome, complete genomehypothetical protein9e-0753.9
NC_020291:5409587:543004854300485430701654Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genometranscriptional regulator, TetR family8e-0753.9
NC_002570:1041342:106282010628201063431612Bacillus halodurans C-125, complete genometranscriptional regulator (TetR/AcrR family)8e-0753.9
NC_010814:155834:160065160065160667603Geobacter lovleyi SZ, complete genometranscriptional regulator, TetR family8e-0753.9
NC_007946:4779745:480969748096974810536840Escherichia coli UTI89, complete genomeUidR transriptional regulator1e-0653.5
NC_005773:866157:882507882507883145639Pseudomonas syringae pv. phaseolicola 1448A, complete genometranscriptional regulator, TetR family1e-0653.5
NC_010170:1417615:142628214262821427076795Bordetella petrii, complete genometranscriptional regulator, TetR-family1e-0653.5
NC_018515:3108755:313167231316723132274603Desulfosporosinus meridiei DSM 13257 chromosome, complete genometranscriptional regulator1e-0653.5
NC_015389:905165:924633924633925349717Coriobacterium glomerans PW2 chromosome, complete genomeregulatory protein TetR1e-0653.5
NC_014915:3320768:336686733668673367790924Geobacillus sp. Y412MC52 chromosome, complete genomeregulatory protein TetR9e-0753.5
NC_015957:8677395:868260586826058683288684Streptomyces violaceusniger Tu 4113 chromosome, complete genomeregulatory protein TetR1e-0653.1
NC_008595:1911491:192312819231281923763636Mycobacterium avium 104, complete genometranscriptional regulator, TetR family protein1e-0653.1
NC_013929:3986272:400539140053914006197807Streptomyces scabiei 87.22 chromosome, complete genomeTetR family transcriptional regulator1e-0653.1
NC_008253:3941938:396844639684463969285840Escherichia coli 536, complete genomeputative transcription regulator protein1e-0653.1
NC_015563:2656628:268139926813992682013615Delftia sp. Cs1-4 chromosome, complete genomeregulatory protein TetR1e-0653.1
NC_016948:678939:710274710274710933660Mycobacterium intracellulare MOTT-64 chromosome, complete genomehypothetical protein2e-0652.8
NC_017221:495088:496425496425497156732Bifidobacterium longum subsp. longum KACC 91563 chromosome,AcrR family transcriptional regulator2e-0652.8
NC_015635:932240:933040933040933612573Microlunatus phosphovorus NM-1, complete genomeTetR family transcriptional regulator2e-0652.8
NC_010102:1979742:200090520009052001543639Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-0652.8
NC_012125:2646792:266813126681312668769639Salmonella enterica subsp. enterica serovar Paratyphi C straintranscriptional regulator2e-0652.8
NC_015164:493159:515760515760516371612Bacteroides salanitronis DSM 18170 chromosome, complete genomeregulatory protein TetR2e-0652.8
NC_013510:888542:914627914627915241615Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, TetR family2e-0652.8
NC_015953:3159234:316659831665983167191594Streptomyces sp. SirexAA-E chromosome, complete genomeTetR family transcriptional regulator2e-0652.8
NC_014666:1805806:182359318235931824237645Frankia sp. EuI1c chromosome, complete genomeregulatory protein TetR3e-0652.4
NC_013446:1889500:190423519042351904771537Comamonas testosteroni CNB-2, complete genometranscriptional regulator, TetR family2e-0652.4
NC_016947:666627:691506691506692165660Mycobacterium intracellulare MOTT-02 chromosome, complete genomehypothetical protein2e-0652.4
NC_014210:5309121:531665153166515317286636Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,transcriptional regulator, TetR family2e-0652.4
NC_016894:3935161:395446439544643955075612Acetobacterium woodii DSM 1030 chromosome, complete genometranscriptional regulator TetR family2e-0652.4
NC_003155:622993:653742653742654326585Streptomyces avermitilis MA-4680, complete genomeTetR-family transcriptional regulator2e-0652.4
NC_016751:1776669:179540217954021795977576Marinitoga piezophila KA3 chromosome, complete genometranscriptional regulator2e-0652.4
NC_000911:2747604:276317027631702763733564Synechocystis sp. PCC 6803, complete genomehypothetical protein3e-0652
NC_017039:2745432:276099827609982761561564Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein3e-0652
NC_017052:2745420:276098627609862761549564Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein3e-0652
NC_017277:2746421:276198727619872762550564Synechocystis sp. PCC 6803, complete genomehypothetical protein3e-0652
NC_008278:2732890:274044927404492741114666Frankia alni ACN14a, complete genomehypothetical protein4e-0651.6
NC_015953:2640500:264052326405232641095573Streptomyces sp. SirexAA-E chromosome, complete genomeregulatory protein TetR4e-0651.6
NC_008700:2788363:280763428076342808254621Shewanella amazonensis SB2B, complete genomeputative transcriptional regulator, TetR family4e-0651.6
NC_015500:1204501:123426812342681234888621Treponema brennaborense DSM 12168 chromosome, complete genometranscriptional regulator, TetR family3e-0651.6
NC_014318:10070730:100870691008706910087725657Amycolatopsis mediterranei U32 chromosome, complete genomeTetR family transcriptional regulator3e-0651.6
NC_017186:10070795:100871341008713410087790657Amycolatopsis mediterranei S699 chromosome, complete genomeTetR family transcriptional regulator3e-0651.6
NC_010723:622928:622928622928623533606Clostridium botulinum E3 str. Alaska E43, complete genomeTetR-family transcriptional regulator6e-0651.2
NC_013665:2132000:213526921352692135904636Methanocella paludicola SANAE, complete genomeTetR family transcriptional regulator5e-0651.2
NC_021184:2936244:295949929594992960146648Desulfotomaculum gibsoniae DSM 7213, complete genometranscriptional regulator5e-0651.2
NC_014152:191200:203522203522204064543Thermincola sp. JR, complete genometranscriptional regulator, TetR family5e-0651.2
NC_016582:1707756:170985717098571710405549Streptomyces bingchenggensis BCW-1 chromosome, complete genomeTetR family transcriptional regulator5e-0651.2
NC_011666:1923776:192555519255551926166612Methylocella silvestris BL2, complete genometranscriptional regulator, TetR family7e-0650.8
NC_010545:2025000:203269620326962033367672Corynebacterium urealyticum DSM 7109, complete genomeputative transcriptional regulator (TetR family)6e-0650.8
NC_008278:7409711:742530174253017425861561Frankia alni ACN14a, complete genomehypothetical protein6e-0650.8
NC_016629:3789554:382760938276093828244636Desulfovibrio africanus str. Walvis Bay chromosome, completeregulatory protein TetR6e-0650.8
NC_009921:5609770:565205756520575652785729Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family7e-0650.4
NC_016907:152500:168261168261168893633Gordonia polyisoprenivorans VH2 plasmid p174, complete sequenceTetR family transcriptional regulator8e-0650.4
NC_018581:1718023:172542617254261726130705Gordonia sp. KTR9 chromosome, complete genomeTranscriptional regulator8e-0650.4
NC_008010:1:138201382014416597Deinococcus geothermalis DSM 11300 plasmid 1, complete sequencetranscriptional regulator, TetR family8e-0650.4