Pre_GI Gene

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Host: NC_008595 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008595:1951887 Mycobacterium avium 104, complete genome

Host Lineage: Mycobacterium avium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: It was derived from an AIDS patient and has been characterized for virulence in the murine model of low-dose aerosol infection in that it could colonize the lung, proliferate within the tissue and disseminate to other organs. Environmental organism which causes infections in birds and humans. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, Mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium avium is ubiquitous in the environment, and can be found in stagnant waters and soils. This organism causes tuberculosis in birds and disseminated infections in immunocompromized humans (the elderly, children, and especially patients with AIDS). Infection results in a characteristic pulmonary disease which requires expensive drug therapy for successful treatment. Most prevalent colony morphotypes are smooth opaque, smooth transparent and rough, with the last two being the faster growers in vivo.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
19518871952249363hypothetical proteinBLASTP
19522511952859609NADPH nitroreductaseQuickGO ontologyBLASTP
195289119550412151putative acyl-CoA dehydrogenaseQuickGO ontologyBLASTP
195512419561911068lipid-transfer proteinQuickGO ontologyBLASTP
19561881956607420protein of unknown function DUF35QuickGO ontologyBLASTP
195660419576321029hypothetical proteinBLASTP
19578011958157357hypothetical proteinBLASTP
19582531959074822retinol dehydrogenase 12QuickGO ontologyBLASTP
19594701959916447hypothetical proteinBLASTP
19599131960620708hypothetical proteinBLASTP
196084419619171074hypothetical proteinBLASTP
196206419634701407putative transposaseQuickGO ontologyBLASTP
19636491964140492hypothetical protein
196441919656931275transposase Mutator family proteinQuickGO ontologyBLASTP
19657461965892147hypothetical protein
19658911966742852short chain dehydrogenaseQuickGO ontologyBLASTP
19667391967332594TetR-family protein transcriptional regulatorQuickGO ontologyBLASTP
19674871967651165hypothetical protein
19679461968632687ThiJPfpI family proteinQuickGO ontologyBLASTP
19687811968900120hypothetical protein
19691171969299183topology modulation proteinQuickGO ontology
19693521969465114hypothetical protein
1969486196957893hypothetical protein
19695931970060468transcription elongation factor GreAQuickGO ontologyBLASTP
19700571970590534transcription elongation factor GreAQuickGO ontologyBLASTP