Pre_GI Gene

Some Help

Host: NC_017221 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017221:495088 Bifidobacterium longum subsp. longum KACC 91563 chromosome,

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. This organism is found in adult humans and formula fed infants as a normal component of gut flora

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
4950884963651278gamma-glutamylcysteine synthetaseQuickGO ontologyBLASTP
496425497156732AcrR family transcriptional regulatorQuickGO ontologyBLASTP
4973534997162364beta-glucosidase-like glycosidaseQuickGO ontologyBLASTP
499756500091336ISXoo11 transposaseQuickGO ontologyBLASTP
5003485016521305transposaseQuickGO ontologyBLASTP
501737502090354hypothetical proteinBLASTP
5023805033901011Esteraselipase-like proteinQuickGO ontologyBLASTP
5034345047621329ABC transporter substrate-binding proteinQuickGO ontologyBLASTP
504898505653756hypothetical proteinBLASTP
5057145073061593aspartylglutamyl-tRNA amidotransferase subunit AQuickGO ontologyBLASTP
507747507884138wcaa5QuickGO ontology
508136508567432OsmC family proteinQuickGO ontologyBLASTP
5087065097821077transcriptional regulatorQuickGO ontologyBLASTP
5099665112101245transposaseQuickGO ontologyBLASTP
511242511718477Mg transport proteinQuickGO ontologyBLASTP
511909512196288hypothetical proteinBLASTP
512183512584402hypothetical proteinBLASTP
5125905138041215beta-13-exoglucanaseQuickGO ontologyBLASTP
514430514681252hypothetical protein
514700515314615transcriptional regulatorQuickGO ontologyBLASTP
5155485168131266transporterQuickGO ontologyBLASTP
5168705185461677esteraseQuickGO ontologyBLASTP