Pre_GI Gene

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Host: NC_013929 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013929:3986272 Streptomyces scabiei 87.22 chromosome, complete genome

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
39862723987063792hypothetical protein
39878223987992171hypothetical protein
39882593988462204hypothetical protein
39887463989234489hypothetical proteinBLASTP
39892313989584354hypothetical proteinBLASTP
39903463990699354HTH DNA-binding proteinQuickGO ontologyBLASTP
399074739919641218integraseQuickGO ontologyBLASTP
399252339997947272hypothetical proteinBLASTP
400028340037743492hypothetical proteinBLASTP
40039484004373426hypothetical proteinBLASTP
40044594004866408hypothetical proteinBLASTP
40048634005381519hypothetical proteinBLASTP
40053914006197807TetR family transcriptional regulatorQuickGO ontologyBLASTP
40063584006705348hypothetical proteinBLASTP