Pre_GI: BLASTP Hits

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Query: NC_004129:1014986:1034087 Pseudomonas fluorescens Pf-5, complete genome

Start: 1034087, End: 1034467, Length: 381

Host Lineage: Pseudomonas protegens Pf-5; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain can suppress the diseases caused by Rhizoctonia solani and Pythium ultimum which affect cotton plants. The production of a number of antibiotics (pyrrolnitrin, pyoluteorin, and 2,4-diacetylphloroglucinol) as well as the production of siderophores (which may affect the ability of competing organisms to obtain environmental iron) by this strain can inhibit phytopathogen growth such as the above-mentioned fungi. The genome of this organism contains a number of genes, estimated at 5.7 % of the chromosome, that encode proteins that are involved in secondary metabolism. A large number of repeat elements (REP) are also found in the genome in greater numbers than in related Pseudomonas spp.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017162:1228723:125547612554761255859384Acinetobacter baumannii 1656-2 chromosome, complete genomePutative 4-carboxymuconolactone decarboxylase6e-42169
NC_010501:4989455:499645349964534996839387Pseudomonas putida W619, complete genomeCarboxymuconolactone decarboxylase2e-38157
NC_015976:2187377:220876922087692209221453Sphingobium sp. SYK-6, complete genome4-carboxymuconolactone decarboxylase7e-33139
NC_014539:743523:781607781607781996390Burkholderia sp. CCGE1003 chromosome 1, complete sequencecarboxymuconolactone decarboxylase4e-32136
NC_009439:3770282:379998837999883800371384Pseudomonas mendocina ymp, complete genome4-carboxymuconolactone decarboxylase6e-32135
NC_015556:1188500:121077412107741211151378Pseudomonas fulva 12-X chromosome, complete genome4-carboxymuconolactone decarboxylase3e-31133
NC_018868:3036205:307045330704533070836384Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome4-carboxymuconolactone decarboxylase3e-30130
NC_008786:3323167:332316733231673323544378Verminephrobacter eiseniae EF01-2, complete genome4-carboxymuconolactone decarboxylase2e-30130
NC_012589:2379709:238536023853602385797438Sulfolobus islandicus L.S.2.15, complete genomeCarboxymuconolactone decarboxylase3e-28123
NC_012622:2319598:232518523251852325622438Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeCarboxymuconolactone decarboxylase3e-28123
NC_012623:277113:292396292396292833438Sulfolobus islandicus Y.N.15.51 chromosome, complete genomecarboxymuconolactone decarboxylase3e-28123
NC_013769:2363980:236843223684322368869438Sulfolobus islandicus L.D.8.5 chromosome, complete genomecarboxymuconolactone decarboxylase3e-28123
NC_012588:2249874:225402322540232254460438Sulfolobus islandicus M.14.25 chromosome, complete genomecarboxymuconolactone decarboxylase3e-28123
NC_012632:2352784:235723723572372357674438Sulfolobus islandicus M.16.27 chromosome, complete genomeCarboxymuconolactone decarboxylase3e-28123
NC_012726:2249831:225428422542842254721438Sulfolobus islandicus M.16.4 chromosome, complete genomeCarboxymuconolactone decarboxylase3e-28123
NC_017275:2283074:228752622875262287963438Sulfolobus islandicus HVE10/4 chromosome, complete genomeCarboxymuconolactone decarboxylase3e-28123
NC_017276:2161535:216598721659872166424438Sulfolobus islandicus REY15A chromosome, complete genomeCarboxymuconolactone decarboxylase3e-28123
NC_007511:3512100:352891835289183529307390Burkholderia sp. 383 chromosome 2, complete sequenceCarboxymuconolactone decarboxylase2e-27121
NC_008061:2368517:239267823926782393067390Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence4-carboxymuconolactone decarboxylase2e-27121
NC_008543:2871747:287391828739182874307390Burkholderia cenocepacia HI2424 chromosome 2, complete sequence4-carboxymuconolactone decarboxylase2e-27121
NC_011001:63986:669026690267288387Burkholderia cenocepacia J2315 chromosome 2, complete sequence4-carboxymuconolactone decarboxylase2e-27121
NC_010552:58294:612086120861594387Burkholderia ambifaria MC40-6 chromosome 2, complete sequence4-carboxymuconolactone decarboxylase3e-27120
NC_002754:2621884:263813526381352638554420Sulfolobus solfataricus P2, complete genome4-carboxymucolactone decarboxylase (pcaC)8e-27119
NC_016027:54305:810328103281409378Gluconacetobacter xylinus NBRC 3288, complete genome4-carboxymuconolactone decarboxylase1e-26118
NC_010545:11950:353623536235859498Corynebacterium urealyticum DSM 7109, complete genomehomolog of 4-carboxymuconolactone decarboxylase1e-26118
NC_016604:3184855:3224813322481332259881176Mycobacterium rhodesiae NBB3 chromosome, complete genome4-carboxymuconolactone decarboxylase5e-26116
NC_013716:1756545:177445817744581774847390Citrobacter rodentium ICC168, complete genomeputative 4-carboxymuconolactone decarboxylase8e-26115
NC_009338:555587:5555875555875567681182Mycobacterium gilvum PYR-GCK chromosome, complete genome4-carboxymuconolactone decarboxylase1e-24111
NC_008705:1839983:1858037185803718592181182Mycobacterium sp. KMS, complete genome4-carboxymuconolactone decarboxylase1e-24111
NC_008705:1839983:1844622184462218458031182Mycobacterium sp. KMS, complete genome4-carboxymuconolactone decarboxylase1e-24111
NC_009077:1725683:1777290177729017784711182Mycobacterium sp. JLS, complete genome4-carboxymuconolactone decarboxylase1e-24111
NC_021177:6954675:6954675695467569566211947Streptomyces fulvissimus DSM 40593, complete genome3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase1e-24111
NC_015137:868944:882837882837883226390Burkholderia sp. CCGE1001 chromosome 2, complete sequencecarboxymuconolactone decarboxylase7e-24108
NC_014623:1600360:1627936162793616291231188Stigmatella aurantiaca DW4/3-1 chromosome, complete genome3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase2e-23107
NC_010617:665830:668820668820669218399Kocuria rhizophila DC2201, complete genome4-carboxymuconolactone decarboxylase1e-2098.6
NC_015675:6493444:650797965079796508359381Mesorhizobium opportunistum WSM2075 chromosome, complete genomecarboxymuconolactone decarboxylase9e-2198.6
NC_014923:5940500:595330859533085953688381Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeCarboxymuconolactone decarboxylase9e-2198.6
NC_019973:5869500:588226858822685882648381Mesorhizobium australicum WSM2073, complete genomeuncharacterized protein, gamma-carboxymuconolactone decarboxylase subunit like protein9e-2198.6
NC_010338:4148667:4168341416834141695311191Caulobacter sp. K31, complete genome3-oxoadipate enol-lactonase3e-2097.1
NC_016111:5181475:5198489519848951999011413Streptomyces cattleya NRRL 8057, complete genome3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase1e-1788.6
NC_014923:5940500:596112259611225961481360Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeCarboxymuconolactone decarboxylase1e-1582
NC_019973:5869500:589008258900825890441360Mesorhizobium australicum WSM2073, complete genomeuncharacterized protein, gamma-carboxymuconolactone decarboxylase subunit like protein1e-1582
NC_015675:6493444:651579365157936516152360Mesorhizobium opportunistum WSM2075 chromosome, complete genomecarboxymuconolactone decarboxylase1e-1582
NC_008146:2744612:274614827461482746348201Mycobacterium sp. MCS, complete genomeCarboxymuconolactone decarboxylase1e-1478.6
NC_016113:994469:100092310009231001327405Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequencecarboxymuconolactone decarboxylase4e-1476.6
NC_007492:3180480:323340432334043233742339Pseudomonas fluorescens PfO-1, complete genomeCarboxymuconolactone decarboxylase4e-1476.6
NC_018645:4490957:449095744909574491376420Desulfobacula toluolica Tol2, complete genome4-carboxymuconolactone decarboxylase7e-1475.9
NC_014958:2614399:263685626368562637203348Deinococcus maricopensis DSM 21211 chromosome, complete genomecarboxymuconolactone decarboxylase1e-1375.1
NC_020409:1173796:119486411948641195268405Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeCarboxymuconolactone decarboxylase2e-1374.7
NC_013856:169974:185306185306185746441Azospirillum sp. B510 plasmid pAB510b, complete sequence4-carboxymuconolactone decarboxylase2e-1374.7
NC_010694:2716348:271859527185952719008414Erwinia tasmaniensis, complete genomeUncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit2e-1374.7
NC_003888:4251867:425899342589934259403411Streptomyces coelicolor A3(2), complete genomedecarboxylase5e-1373.2
NC_016612:443398:451508451508451921414Klebsiella oxytoca KCTC 1686 chromosome, complete genomegamma-carboxymuconolactone decarboxylase subunit-like protein7e-1372.4
NC_011886:2369980:237783723778372378160324Arthrobacter chlorophenolicus A6, complete genomeCarboxymuconolactone decarboxylase8e-1372.4
NC_010943:1332243:134242113424211342804384Stenotrophomonas maltophilia K279a, complete genomeputative 4-carboxymuconolactone decarboxylase1e-1272
NC_007348:2519447:252559725255972525989393Ralstonia eutropha JMP134 chromosome 2, complete sequenceCarboxymuconolactone decarboxylase6e-1269.7
NC_009921:5609770:562771356277135628615903Frankia sp. EAN1pec, complete genomeCarboxymuconolactone decarboxylase5e-1269.7
NC_015578:465814:486086486086486475390Treponema primitia ZAS-2 chromosome, complete genomecarboxymuconolactone decarboxylase2e-1167.8
NC_003552:484000:491290491290492042753Methanosarcina acetivorans C2A, complete genome4-carboxymuconolactone decarboxylase3e-1167.4
NC_017195:2498113:250834425083442509099756Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, complete4-carboxymuconolactone decarboxylase3e-1167.4
NC_014838:175939:195049195049195357309Pantoea sp. At-9b plasmid pPAT9B01, complete sequenceCarboxymuconolactone decarboxylase3e-1167
NC_014828:1632000:164383616438361644234399Ethanoligenens harbinense YUAN-3 chromosome, complete genomeCarboxymuconolactone decarboxylase4e-1167
NC_016612:5231065:527290452729045273230327Klebsiella oxytoca KCTC 1686 chromosome, complete genomecarboxymuconolactone decarboxylase4e-1166.6
NC_006569:370846:388536388536388925390Silicibacter pomeroyi DSS-3 megaplasmid, complete sequencecarboxymuconolactone decarboxylase family protein9e-1165.5
NC_004088:2541033:254481525448152545177363Yersinia pestis KIM, complete genomehypothetical protein2e-1064.7
NC_007355:923218:929880929880930632753Methanosarcina barkeri str. fusaro chromosome 1, complete sequence4-carboxymuconolactone decarboxylase2e-1064.3
NC_010634:2252329:226535622653562265778423Yersinia pseudotuberculosis PB1/+, complete genomecarboxymuconolactone decarboxylase2e-1064.3
NC_006155:2334122:234714923471492347571423Yersinia pseudotuberculosis IP 32953, complete genomeputative decarboxylase2e-1064.3
NC_008149:1669921:168295916829591683381423Yersinia pestis Nepal516, complete genomedecarboxylase2e-1064.3
NC_010465:2428620:243234224323422432764423Yersinia pseudotuberculosis YPIII, complete genomeCarboxymuconolactone decarboxylase2e-1064.3
NC_008150:1543635:155667215566721557094423Yersinia pestis Antiqua, complete genomeputative decarboxylase2e-1064.3
NC_005810:2043730:205676920567692057191423Yersinia pestis biovar Microtus str. 91001, complete genomeputative decarboxylase2e-1064.3
NC_003143:2258636:227167422716742272096423Yersinia pestis CO92, complete genomeputative decarboxylase2e-1064.3
NC_009381:1258396:126134912613491261771423Yersinia pestis Pestoides F chromosome, complete genomedecarboxylase2e-1064.3
NC_009708:2392640:239636223963622396784423Yersinia pseudotuberculosis IP 31758 chromosome, complete genomecarboxymuconolactone decarboxylase family protein2e-1064.3
NC_014029:2335021:233874323387432339165423Yersinia pestis Z176003 chromosome, complete genomeputative decarboxylase2e-1064.3
NC_017154:2258228:227126422712642271686423Yersinia pestis D106004 chromosome, complete genomeputative decarboxylase2e-1064.3
NC_017265:2263347:226571322657132266135423Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative decarboxylase2e-1064.3
NC_018720:2097694:212565121256512126049399Bifidobacterium asteroides PRL2011 chromosome, complete genomecarboxymuconolactone decarboxylase3e-1063.5
NC_013929:5431954:544546154454615445790330Streptomyces scabiei 87.22 chromosome, complete genomecarboxymuconolactone decarboxylase family protein4e-1063.2
NC_015434:1313979:132102713210271321413387Verrucosispora maris AB-18-032 chromosome, complete genomecarboxymuconolactone decarboxylase6e-1062.8
NC_009921:5371483:538301153830115383190180Frankia sp. EAN1pec, complete genomecarboxymuconolactone decarboxylase1e-0961.6
NC_021066:1778000:178243317824331783269837Raoultella ornithinolytica B6, complete genomeputative carboxymuconolactone decarboxylase1e-0961.6
NC_013592:3397304:341295534129553413260306Dickeya dadantii Ech586, complete genomeCarboxymuconolactone decarboxylase2e-0961.2
NC_012984:2681548:270364927036492704035387Lactobacillus plantarum JDM1, complete genome4-carboxymuconolactone decarboxylase (putative)3e-0960.5
NC_010545:1475410:150400715040071504378372Corynebacterium urealyticum DSM 7109, complete genomehypothetical protein9e-0958.9
NC_010512:110932:123378123378123755378Burkholderia cenocepacia MC0-3 chromosome 3, complete sequenceCarboxymuconolactone decarboxylase1e-0858.5
NC_016002:2825017:284649028464902846894405Pseudogulbenkiania sp. NH8B, complete genomecarboxymuconolactone decarboxylase1e-0858.5
NC_014041:1395761:140619314061931406585393Zunongwangia profunda SM-A87 chromosome, complete genomeCarboxymuconolactone decarboxylase2e-0858.2
NC_011751:1770376:179225417922541793057804Escherichia coli UMN026 chromosome, complete genomeputative carboxymuconolactone decarboxylase2e-0857.4
NC_014307:1855356:187789718778971878553657Ralstonia solanacearum CFBP2957 chromosome, complete genome3e-0857.4
NC_015856:3536441:354329635432963544132837Collimonas fungivorans Ter331 chromosome, complete genome4-carboxymuconolactone decarboxylase3e-0857.4
NC_015759:760671:773288773288773614327Weissella koreensis KACC 15510 chromosome, complete genomecarboxymuconolactone decarboxylase4e-0857
NC_013517:2815482:282676828267682827502735Sebaldella termitidis ATCC 33386, complete genomeCarboxymuconolactone decarboxylase4e-0856.6
NC_011283:785973:801947801947802750804Klebsiella pneumoniae 342 chromosome, complete genomecarboxymuconolactone decarboxylase family protein5e-0856.2
NC_013850:2846069:286304428630442863448405Klebsiella variicola At-22 chromosome, complete genomeCarboxymuconolactone decarboxylase6e-0856.2
NC_014666:1805806:180891418089141809678765Frankia sp. EuI1c chromosome, complete genomeCarboxymuconolactone decarboxylase1e-0755.5
NC_018720:1468397:147570314757031476029327Bifidobacterium asteroides PRL2011 chromosome, complete genome4-carboxymuconolactone decarboxylase1e-0755.1
NC_013172:2556517:256011125601112560482372Brachybacterium faecium DSM 4810, complete genomeuncharacterized protein, gamma-carboxymuconolactone decarboxylase subunit like protein2e-0754.3
NC_014364:4488875:451632745163274516653327Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeCarboxymuconolactone decarboxylase2e-0754.3
NC_018720:2097694:210024021002402101004765Bifidobacterium asteroides PRL2011 chromosome, complete genomecarboxymuconolactone decarboxylase2e-0754.3
NC_003228:2473956:248917524891752490008834Bacteroides fragilis NCTC 9343, complete genomepossible carboxymuconolactone decarboxylase3e-0753.9
NC_016776:2549465:256396825639682564801834Bacteroides fragilis 638R, complete genomecarboxymuconolactone decarboxylase3e-0753.9
NC_009725:3878862:388620238862023886603402Bacillus amyloliquefaciens FZB42, complete genomehypothetical protein4e-0753.5
NC_020410:3868573:387674038767403877141402Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeUncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit4e-0753.5
NC_019842:3921424:392947639294763929877402Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein4e-0753.5
NC_020272:20435:335623356233963402Bacillus amyloliquefaciens IT-45, complete genome4-carboxymuconolactone decarboxylase4e-0753.5
NC_015064:151607:154540154540154953414Acidobacterium sp. MP5ACTX9 chromosome, complete genomeCarboxymuconolactone decarboxylase6e-0752.8
NC_014371:1358615:604260426830789Prevotella melaninogenica ATCC 25845 chromosome chromosome II,carboxymuconolactone decarboxylase family protein1e-0652
NC_004578:3193490:322414632241463224934789Pseudomonas syringae pv. tomato str. DC3000, complete genome4-carboxymuconolactone decarboxylase, putative2e-0651.6
NC_016628:133841:145161145161145883723Vibrio furnissii NCTC 11218 chromosome 2, complete sequence4-carboxymuconolactone decarboxylase5e-0650.1
NC_010628:675445:684268684268685059792Nostoc punctiforme PCC 73102, complete genomeCarboxymuconolactone decarboxylase9e-0648.9