Pre_GI Gene

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Host: NC_013929 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013929:5431954 Streptomyces scabiei 87.22 chromosome, complete genome

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
54312235431957735mobilisation proteinQuickGO ontologyBLASTP
543195454336691716mobilisation relaxase componentQuickGO ontologyBLASTP
54336885433882195
54339635434508546hypothetical proteinBLASTP
543450554358031299DNA-binding proteinQuickGO ontologyBLASTP
54359385436402465hypothetical proteinBLASTP
543644254377281287hypothetical proteinBLASTP
543772554389601236phosphataseQuickGO ontologyBLASTP
54389575439496540nucleotide-phosphate interconversion proteinQuickGO ontologyBLASTP
54394935440029537hypothetical proteinBLASTP
544002654411411116glycosyl transferase family proteinQuickGO ontologyBLASTP
544121854422851068esteraseQuickGO ontologyBLASTP
544234854434151068hypothetical proteinBLASTP
54436715444177507NUDIX hydrolaseQuickGO ontologyBLASTP
54442965445189894DNA-binding proteinQuickGO ontologyBLASTP
54454615445790330carboxymuconolactone decarboxylase family proteinQuickGO ontologyBLASTP
54458225446664843short chain dehydrogenaseoxidoreductaseQuickGO ontologyBLASTP
54467515447731981aldoketo reductaseQuickGO ontologyBLASTP
54478265448599774dehydrogenasereductaseQuickGO ontologyBLASTP
54486135448930318hypothetical proteinBLASTP
54489675449755789oxidoreductaseQuickGO ontologyBLASTP
54498015450685885oxidoreductaseQuickGO ontologyBLASTP
545074054517441005hypothetical protein
545176254529041143monooxygenaseQuickGO ontologyBLASTP
545295854541661209low temperature proteinQuickGO ontologyBLASTP
54545285454752225DNA-binding proteinQuickGO ontologyBLASTP
54548365455093258DNA-binding proteinQuickGO ontologyBLASTP
54552485455637390hypothetical proteinBLASTP
54556375455975339hypothetical proteinBLASTP
545605154574241374hypothetical protein
54578135458277465hypothetical protein