Some Help

Query: NC_013929:5431954 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 5431954, End: 5458277, Length: 26324

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015953:32270003227000325159924600Streptomyces sp. SirexAA-E chromosome, complete genome0896BLASTN svgBLASTP svg
NC_003155:32097932097933918518207Streptomyces avermitilis MA-4680, complete genome3e-139504BLASTN svgBLASTP svg
NC_018750:65882066588206661440326198Streptomyces venezuelae ATCC 10712, complete genome4e-132480BLASTN svgBLASTP svg
NC_018750:52938295293829531859924771Streptomyces venezuelae ATCC 10712, complete genome8e-118432BLASTN svgBLASTP svg
NC_018750:50787055078705510289824194Streptomyces venezuelae ATCC 10712, complete genome3e-49204BLASTN svgBLASTP svg
NC_013521:16193941619394164259923206Sanguibacter keddieii DSM 10542, complete genome1e-36163BLASTN svgBLASTP svg
NC_015957:32821833282183330581123629Streptomyces violaceusniger Tu 4113 chromosome, complete genome7e-29137BLASTN svgBLASTP svg
NC_007760:36554333655433369618740755Anaeromyxobacter dehalogenans 2CP-C, complete genome4e-21111BLASTN svgBLASTP svg
NC_018750:61326196132619616363731019Streptomyces venezuelae ATCC 10712, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_008687:38826238826241359925338Paracoccus denitrificans PD1222 chromosome 2, complete sequence5e-1487.7BLASTN svgBLASTP svg
NC_021177:38674393867439388623218794Streptomyces fulvissimus DSM 40593, complete genome8e-1383.8BLASTN svgBLASTP svg
NC_021177:3598700*3598700361863819939Streptomyces fulvissimus DSM 40593, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_008609:112340*11234013168719348Pelobacter propionicus DSM 2379, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_008095:20715002071500210351032011Myxococcus xanthus DK 1622, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010572:45054284505428452522719800Streptomyces griseus subsp. griseus NBRC 13350, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014218:253558*25355828008626529Arcanobacterium haemolyticum DSM 20595 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_020409:11737961173796119659322798Desulfovibrio piezophilus str. nov C1TLV30 chromosome, complete1e-0869.9BLASTN svgBLASTP svg
NC_019744:20500205004680426305Cylindrospermum stagnale PCC 7417 plasmid pCYLST.02, complete5e-0867.9BLASTN svgBLASTP svg
NC_015957:74084667408466745609947634Streptomyces violaceusniger Tu 4113 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_003888:76596397659639770388744249Streptomyces coelicolor A3(2), complete genome8e-0763.9BLASTN svgBLASTP svg
NC_011886:17703917703920120524167Arthrobacter chlorophenolicus A6, complete genome3e-0661.9BLASTN svgBLASTP svg