Pre_GI: BLASTP Hits

Some Help

Query: NC_003143:2804500:2818962 Yersinia pestis CO92, complete genome

Start: 2818962, End: 2819738, Length: 777

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a recent Orientalis subtype isolated in the USA from a patient who died of pneumonic plague after acquiring the disease from an infected cat. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017168:2941938:294269829426982943474777Yersinia pestis A1122 chromosome, complete genometrans-aconitate 2-methyltransferase2e-149528
NC_004088:1851500:185243218524321853208777Yersinia pestis KIM, complete genometrans-aconitate 2-methyltransferase2e-149528
NC_010634:2894631:293014229301422930918777Yersinia pseudotuberculosis PB1/+, complete genomemethyltransferase type 112e-149528
NC_006155:2979500:301220030122003012976777Yersinia pseudotuberculosis IP 32953, complete genometrans-aconitate 2-methyltransferase2e-149528
NC_008149:2366500:238074623807462381522777Yersinia pestis Nepal516, complete genomepuative trans-aconitate methyltransferase2e-149528
NC_005810:2549680:258501625850162585792777Yersinia pestis biovar Microtus str. 91001, complete genometrans-aconitate 2-methyltransferase2e-149528
NC_010159:1818500:183300018330001833776777Yersinia pestis Angola, complete genometrans-aconitate 2-methyltransferase2e-149528
NC_009381:2138625:217117021711702171946777Yersinia pestis Pestoides F chromosome, complete genometrans-aconitate 2-methyltransferase2e-149528
NC_014029:2756500:277128527712852772061777Yersinia pestis Z176003 chromosome, complete genometrans-aconitate 2-methyltransferase2e-149528
NC_017154:2804000:281843528184352819211777Yersinia pestis D106004 chromosome, complete genometrans-aconitate 2-methyltransferase2e-149528
NC_017160:2787637:278984427898442790620777Yersinia pestis D182038 chromosome, complete genometrans-aconitate 2-methyltransferase2e-149528
NC_009708:1735903:174011417401141740890777Yersinia pseudotuberculosis IP 31758 chromosome, complete genometrans-aconitate 2-methyltransferase3e-148524
NC_011742:1574036:159300815930081593766759Escherichia coli S88 chromosome, complete genometrans-aconitate 2-methyltransferase2e-76285
NC_008253:1534840:155279515527951553553759Escherichia coli 536, complete genometrans-aconitate 2-methyltransferase7e-75280
NC_014910:2015627:203112920311292031920792Alicycliphilus denitrificans BC chromosome, complete genometrans-aconitate 2-methyltransferase4e-74278
CP002797:1591000:160597616059761606734759Escherichia coli NA114, complete genomeTrans-aconitate 2-methyltransferase6e-74277
NC_015563:4773415:477860047786004779406807Delftia sp. Cs1-4 chromosome, complete genometrans-aconitate 2-methyltransferase4e-72271
NC_013716:1618249:162083716208371621598762Citrobacter rodentium ICC168, complete genomepuative trans-aconitate methyltransferase1e-68259
NC_008702:2892605:291301429130142913775762Azoarcus sp. BH72, complete genomeprobable trans-aconitate 2-methyltransferase5e-68257
NC_009656:2663387:268195426819542682781828Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein3e-44178
NC_016111:2257166:227162322716232272432810Streptomyces cattleya NRRL 8057, complete genomeTrans-aconitate 2-methyltransferase2e-39162
NC_013093:1411882:143210914321091432858750Actinosynnema mirum DSM 43827, complete genomeTrans-aconitate 2-methyltransferase2e-38159
NC_013159:1422370:142494614249461425713768Saccharomonospora viridis DSM 43017, complete genometrans-aconitate methyltransferase4e-38158
NC_017955:693303:693303693303694103801Modestobacter marinus, complete genometrans-aconitate methyltransferase1e-34146
NC_013037:1587673:158906315890631589827765Dyadobacter fermentans DSM 18053, complete genomeTrans-aconitate 2-methyltransferase3e-29128
NC_014638:363577:385310385310386029720Bifidobacterium bifidum PRL2010 chromosome, complete genometrans-aconitate 2-methyltransferase6e-25114
NC_017265:1571305:157351215735121573775264Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,7e-1994.4
NC_015681:102000:108341108341109132792Thermodesulfatator indicus DSM 15286 chromosome, complete genometrans-aconitate 2-methyltransferase1e-1583.6
NC_013730:3137391:315058331505833151362780Spirosoma linguale DSM 74, complete genomeMethyltransferase type 111e-1273.9
NC_014633:837588:863073863073863852780Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequencebiotin biosynthesis protein BioC1e-1067
NC_013510:1295439:1308611130861113096241014Thermomonospora curvata DSM 43183, complete genomeMethyltransferase type 111e-0963.5
NC_009727:1001203:102293210229321023675744Coxiella burnetii Dugway 7E9-12, complete genomeputative biotin biosynthesis protein BioC3e-0962.4
NC_011528:767940:788760788760789506747Coxiella burnetii CbuK_Q154, complete genomebiotin synthesis protein3e-0962.4
NC_011527:953442:974949974949975695747Coxiella burnetii CbuG_Q212, complete genomebiotin synthesis protein3e-0962.4
NC_015656:2565417:256756225675622568314753Frankia symbiont of Datisca glomerata chromosome, complete genometype 11 methyltransferase3e-0859.3
NC_006582:4256915:426283142628314263676846Bacillus clausii KSM-K16, complete genomehypothetical protein9e-0857.4
NC_013595:8553904:856936285693628570117756Streptosporangium roseum DSM 43021, complete genomehypothetical protein1e-0653.9
NC_007604:1442500:145991414599141460555642Synechococcus elongatus PCC 7942, complete genomemembrane-associated protein8e-0650.8