Pre_GI: BLASTP Hits

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Query: NC_014323:3976351:4005741 Herbaspirillum seropedicae SmR1 chromosome, complete genome

Start: 4005741, End: 4006313, Length: 573

Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007508:5093365:510796051079605108592633Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative transcriptional regulator, TetR family3e-54211
NC_014666:2629799:264302426430242643593570Frankia sp. EuI1c chromosome, complete genomeregulatory protein TetR2e-22105
NC_014323:3976351:400723340072334007799567Herbaspirillum seropedicae SmR1 chromosome, complete genomeTetR family transcription regulator protein9e-2096.7
NC_003155:622993:653742653742654326585Streptomyces avermitilis MA-4680, complete genomeTetR-family transcriptional regulator1e-1892.8
NC_015656:2900730:291491029149102915503594Frankia symbiont of Datisca glomerata chromosome, complete genomeregulatory protein TetR2e-1892
NC_014310:1750817:175724317572431757839597Ralstonia solanacearum PSI07 megaplasmid, complete sequenceTetR family transcriptional regulator1e-1789.4
NC_009921:1813500:184397718439771844687711Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family1e-1789.4
NC_015138:4205986:422692442269244227514591Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeregulatory protein TetR1e-1789.4
NC_015434:666692:702511702511703194684Verrucosispora maris AB-18-032 chromosome, complete genomeTetR family transcriptional regulator3e-1788.2
NC_010688:3515885:352608335260833526709627Xanthomonas campestris pv. campestris, complete genometranscriptional regulator, TetR family4e-1787.4
NC_003902:1416000:142181514218151422441627Xanthomonas campestris pv. campestris str. ATCC 33913, completetranscriptional regulator4e-1787.4
NC_016114:7282882:730012873001287300718591Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeregulatory protein TetR2e-1685.1
NC_016582:7699420:770664677066467707239594Streptomyces bingchenggensis BCW-1 chromosome, complete genomeTetR family transcriptional regulator3e-1685.1
NC_012489:3503632:350485135048513505480630Gemmatimonas aurantiaca T-27, complete genomeTetR family transcriptional regulator3e-1684.7
NC_011365:1596652:161991016199101620509600Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeTetR family transcriptional regulator5e-1684
NC_009664:4423829:442487344248734425499627Kineococcus radiotolerans SRS30216, complete genometranscriptional regulator, TetR family2e-1582.4
NC_014666:1117000:113313811331381133842705Frankia sp. EuI1c chromosome, complete genomeregulatory protein TetR2e-1582.4
NC_015063:122000:9999999910595597Rahnella sp. Y9602 plasmid pRAHAQ02, complete sequenceTetR family transcriptional regulator2e-1582
NC_015063:1:9999999910595597Rahnella sp. Y9602 plasmid pRAHAQ02, complete sequenceTetR family transcriptional regulator2e-1582
NC_007492:3180480:319538131953813195968588Pseudomonas fluorescens PfO-1, complete genomeTranscriptional Regulator, TetR family2e-1582
NC_015580:3411802:342310334231033423645543Novosphingobium sp. PP1Y, complete genomeTetR family transcriptional regulator4e-1580.9
NC_012912:2800884:281222328122232812819597Dickeya zeae Ech1591, complete genometranscriptional regulator, TetR family4e-1580.9
NC_010508:2776283:278996127899612790557597Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencetranscriptional regulator, TetR family1e-1479.7
NC_012704:696374:705911705911706603693Corynebacterium kroppenstedtii DSM 44385, complete genometranscriptional regulator, TetR family1e-1479.7
NC_015566:3417951:342511634251163425712597Serratia sp. AS12 chromosome, complete genomeregulatory protein TetR1e-1479.3
NC_008278:613329:625168625168625779612Frankia alni ACN14a, complete genomeputative tetR-family transcriptional regulator2e-1478.6
NC_009664:4347718:435952443595244360177654Kineococcus radiotolerans SRS30216, complete genometranscriptional regulator, TetR family3e-1478.2
NC_015951:107360:117786117786118340555Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, completeregulatory protein TetR5e-1477.4
NC_013947:6221877:622643162264316226991561Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, TetR family1e-1376.6
NC_013093:3068486:311332431133243113875552Actinosynnema mirum DSM 43827, complete genometranscriptional regulator, TetR family1e-1376.3
NC_017955:343931:358000358000358650651Modestobacter marinus, complete genomeTetR family transcriptional regulator2e-1375.5
NC_015709:1769806:178762117876211788307687Zymomonas mobilis subsp. pomaceae ATCC 29192 chromosome, completeTetR family transcriptional regulator1e-1272.8
NC_013739:5535945:554067855406785541244567Conexibacter woesei DSM 14684, complete genometranscriptional regulator, TetR family1e-1272.4
NC_006361:4597718:462450046245004625183684Nocardia farcinica IFM 10152, complete genomeputative transcriptional regulator2e-1272.4
NC_013929:5850599:586993558699355870588654Streptomyces scabiei 87.22 chromosome, complete genometranscriptional regulator2e-1272
NC_014307:1131241:114012811401281140727600Ralstonia solanacearum CFBP2957 chromosome, complete genomeTetR family transcriptional regulator3e-1271.6
NC_003888:4523500:452350245235024524395894Streptomyces coelicolor A3(2), complete genometetR-family transcriptional regulator5e-1270.9
NC_009921:4903688:490439949043994905013615Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family6e-1270.5
NC_011365:1171536:117691611769161177497582Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeTetR family transcriptional regulator6e-1270.5
NC_013521:2193203:219552721955272196075549Sanguibacter keddieii DSM 10542, complete genometranscriptional regulator, tetR family1e-1169.7
NC_008699:2294361:233821723382172338930714Nocardioides sp. JS614, complete genomeregulatory protein, TetR1e-1169.3
NC_016111:1904859:191737419173741917961588Streptomyces cattleya NRRL 8057, complete genometetR family transcriptional regulator2e-1169.3
NC_015957:7348269:735711373571137357745633Streptomyces violaceusniger Tu 4113 chromosome, complete genomeregulatory protein TetR3e-1168.2
NC_013739:5705325:573395457339545734559606Conexibacter woesei DSM 14684, complete genometranscriptional regulator, TetR family4e-1167.8
NC_013526:955848:976385976385977116732Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeregulatory protein TetR5e-1167.4
NC_015434:2683631:269688526968852697439555Verrucosispora maris AB-18-032 chromosome, complete genomeTetR family transcriptional regulator2e-1065.5
NC_009953:2867864:289295728929572893628672Salinispora arenicola CNS-205 chromosome, complete genomeTetR family transcriptional regulator3e-1065.1
NC_016582:6999074:700012270001227000724603Streptomyces bingchenggensis BCW-1 chromosome, complete genomeTetR family transcriptional regulator1e-0962.4
NC_015957:7249873:726786572678657268458594Streptomyces violaceusniger Tu 4113 chromosome, complete genomeregulatory protein TetR2e-0962
NC_011283:2836000:286975928697592870352594Klebsiella pneumoniae 342 chromosome, complete genometranscriptional regulator TetR family3e-0961.6
NC_016783:1374464:137446413744641375054591Corynebacterium diphtheriae INCA 402 chromosome, complete genomeTetR family transcriptional regulator4e-0961.2
NC_016785:1321700:133174713317471332337591Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeTetR family transcriptional regulator4e-0961.2
NC_016799:1343020:140561614056161406206591Corynebacterium diphtheriae 31A chromosome, complete genomeTetR family transcriptional regulator4e-0961.2
NC_016800:1378728:137872813787281379318591Corynebacterium diphtheriae BH8 chromosome, complete genomeTetR family transcriptional regulator4e-0961.2
NC_016788:1349500:134957413495741350164591Corynebacterium diphtheriae HC04 chromosome, complete genomeTetR family transcriptional regulator4e-0961.2
NC_017271:1477323:148206814820681482541474Xanthomonas campestris pv. raphani 756C chromosome, completetranscriptional regulator3e-0961.2
NC_016789:1334514:139597213959721396562591Corynebacterium diphtheriae PW8 chromosome, complete genomeTetR family transcriptional regulator5e-0960.8
NC_016801:1361597:139529213952921395882591Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeTetR family transcriptional regulator5e-0960.8
NC_016802:1317365:135106213510621351652591Corynebacterium diphtheriae HC02 chromosome, complete genomeTetR family transcriptional regulator5e-0960.8
NC_013850:2846069:285969628596962860289594Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, TetR family1e-0859.7
NC_007164:380000:392463392463393029567Corynebacterium jeikeium K411, complete genomeputative transcriptional regulator (TetR family)1e-0859.7
NC_015434:1173794:119680711968071197418612Verrucosispora maris AB-18-032 chromosome, complete genomeTetR family transcriptional regulator2e-0858.9
NC_017093:5225864:523639552363955237063669Actinoplanes missouriensis 431, complete genomeputative TetR-family transcriptional regulator2e-0858.9
NC_009921:5371483:537465553746555375305651Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family2e-0858.5
NC_016582:11734963:117504131175041311750997585Streptomyces bingchenggensis BCW-1 chromosome, complete genomeTetR family transcriptional regulator5e-0857.4
NC_016113:1143580:116248011624801163136657Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequencetranscriptional regulator7e-0857
NC_008596:3404832:342944634294463430054609Mycobacterium smegmatis str. MC2 155, complete genomeTetR family protein transcriptional regulatory protein1e-0756.2
NC_016582:175589:194439194439195059621Streptomyces bingchenggensis BCW-1 chromosome, complete genomeTetR family transcriptional regulator4e-0754.7
NC_016582:2069677:2077881207788120828304950Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative type I polyketide synthase3e-0754.7
NC_008705:27434:515445154452149606Mycobacterium sp. KMS, complete genometranscriptional regulator, TetR family3e-0754.7
NC_008146:20047:442044420444809606Mycobacterium sp. MCS, complete genometranscriptional regulator, TetR family3e-0754.7
NC_018524:4848154:489638948963894896982594Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomebacterial regulatory s, lacI family protein8e-0753.5
NC_016932:1246235:125202512520251252627603Corynebacterium pseudotuberculosis 316 chromosome, complete genomeHTH-type transcriptional repressor KstR3e-0652
NC_013385:1007616:100995610099561010600645Ammonifex degensii KC4, complete genometranscriptional regulator, TetR family3e-0651.6
NC_014329:1261480:126727012672701267872603Corynebacterium pseudotuberculosis FRC41 chromosome, completeTetR family transcriptional regulator3e-0651.6
NC_016781:1261300:126709012670901267692603Corynebacterium pseudotuberculosis 3/99-5 chromosome, completeHTH-type transcriptional repressor KstR3e-0651.6
NC_017031:1261289:126707912670791267681603Corynebacterium pseudotuberculosis P54B96 chromosome, completeHTH-type transcriptional repressor KstR3e-0651.6
NC_017300:1258861:126465112646511265253603Corynebacterium pseudotuberculosis 1002 chromosome, completeHTH-type transcriptional repressor KstR3e-0651.6
NC_017301:1261167:126695712669571267559603Corynebacterium pseudotuberculosis C231 chromosome, completeHTH-type transcriptional repressor KstR3e-0651.6
NC_017303:1261311:126710112671011267703603Corynebacterium pseudotuberculosis I19 chromosome, complete genomeHTH-type transcriptional repressor KstR3e-0651.6
NC_017305:1258840:126463012646301265232603Corynebacterium pseudotuberculosis PAT10 chromosome, completeHTH-type transcriptional repressor KstR3e-0651.6
NC_016147:3349272:335056133505613351142582Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeTetR family transcriptional regulator4e-0650.8
NC_011894:6888562:689151368915136892166654Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, TetR family7e-0650.4
NC_014318:1537732:154140715414071541916510Amycolatopsis mediterranei U32 chromosome, complete genomeTetR family transcriptional regulator9e-0650.1