Pre_GI Gene

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Host: NC_017271 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_017271:1477323 Xanthomonas campestris pv. raphani 756C chromosome, complete

Host Lineage: Xanthomonas campestris; Xanthomonas; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: These organisms are almost exclusively found associated with their plant hosts and are not found free in the soil. This species is a major cause of black rot in crucifers, a disease that results in massive tissue degeneration. It also produces an extracellular polysaccharide known as xanthan, which is harvested commercially as a food stabilizing agent for use in industry.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
147732314784591137hypothetical proteinBLASTP
14784431478778336hypothetical proteinBLASTP
147880514800611257isopenicillin N epimeraseQuickGO ontologyBLASTP
14800311480243213hypothetical protein
14803041480849546alcohol dehydrogenaseQuickGO ontologyBLASTP
148086114819851125transaminaseQuickGO ontologyBLASTP
14820681482541474transcriptional regulatorQuickGO ontologyBLASTP
14828441483578735coenzyme F420-dependent NADP oxidoreductaseQuickGO ontologyBLASTP
148468714873532667type III secretion translocon protein HrpFQuickGO ontologyBLASTP
14877291487860132hypothetical protein
14879001488016117IS5 transposaseQuickGO ontology
14881511488306156hypothetical protein
148873314956296897type III effector protein XopADQuickGO ontologyBLASTP
14960431496678636type III effector protein XopATQuickGO ontology
14967631497743981transposaseQuickGO ontologyBLASTP
14981161498592477IS4 family transposaseQuickGO ontologyBLASTP
14990161499342327transposaseQuickGO ontologyBLASTP
14994941500117624hypothetical protein
15005871501177591hypothetical protein
150117415031892016type III effector protein XopF1QuickGO ontologyBLASTP