Pre_GI Gene

Some Help

Host: NC_003902 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_003902:1416000 Xanthomonas campestris pv. campestris str. ATCC 33913, complete

Host Lineage: Xanthomonas campestris; Xanthomonas; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: This strain was originally isolated from cabbage. Causes black rot disease in crucifers. This genus consists of plant-specific yellow-pigmented microbes, some of which are economically important phytopathogens that devastate crops such as citrus plants, rice, beans, grape, and cotton. These organisms are almost exclusively found associated with their plant hosts and are not found free in the soil. This species is a major cause of black rot in crucifers, a disease that results in massive tissue degeneration. It also produces an extracellular polysaccharide known as xanthan, which is harvested commercially as a food stabilizing agent for use in industry.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
14161161416928813tryptophan 23-dioxygenaseQuickGO ontologyBLASTP
141707114185251455hypothetical proteinBLASTP
141856114198081248isopenicillin N epimeraseQuickGO ontologyBLASTP
14198051420596792alcohol dehydrogenaseQuickGO ontologyBLASTP
142060814217321125transaminaseQuickGO ontologyBLASTP
14218151422441627transcriptional regulatorQuickGO ontologyBLASTP
14225911423325735hypothetical proteinBLASTP
142433514271002766HrpF proteinQuickGO ontologyBLASTP
14272301428096867hypothetical proteinBLASTP
14284631429452990HrpW proteinQuickGO ontologyBLASTP
14297241430206483HpaB proteinQuickGO ontologyBLASTP
14302621430534273HrpE proteinQuickGO ontologyBLASTP
14306201430862243HrpD6 proteinQuickGO ontologyBLASTP
14308731431820948HrpD5 proteinQuickGO ontologyBLASTP
14318171432632816HpaA proteinQuickGO ontologyBLASTP
14326291432871243HrcS proteinQuickGO ontologyBLASTP
14328941433538645type III secretion system proteinQuickGO ontologyBLASTP
14335251434439915HrcQ proteinQuickGO ontologyBLASTP
14345721435183612HpaP proteinQuickGO ontologyBLASTP
143520714371291923HrcVQuickGO ontologyBLASTP
143713814382111074type III secretion system protein HrcUQuickGO ontologyBLASTP