Pre_GI Gene

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Host: NC_015951 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015951:107360 Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, complete

Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
108626109270645CRISPR-associated protein Cse3 familyQuickGO ontologyBLASTP
109267110130864CRISPR-associated protein Cas5 familyQuickGO ontologyBLASTP
1101271113021176CRISPR-associated protein Cse4 familyQuickGO ontologyBLASTP
111459112151693CRISPR-associated protein Cse2 familyQuickGO ontologyBLASTP
1121481137581611CRISPR-associated protein Cse1 familyQuickGO ontologyBLASTP
1140161167872772CRISPR-associated helicase Cas3QuickGO ontologyBLASTP
117786118340555regulatory protein TetRQuickGO ontologyBLASTP
118451119407957alcohol dehydrogenase GroES domain-containing proteinQuickGO ontologyBLASTP
119638120231594peptidase M15B and M15C DD-carboxypeptidase VanYendolysinQuickGO ontologyBLASTP
120870121121252plasmid stabilization systemQuickGO ontology
121118121375258prevent-host-death family proteinQuickGO ontology
1222391235671329Recombination endonuclease VIIQuickGO ontologyBLASTP
1241581254291272transposase mutator typeQuickGO ontologyBLASTP