Pre_GI Gene

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Host: NC_008278 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008278:613329 Frankia alni ACN14a, complete genome

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
613329613592264hypothetical proteinBLASTP
613691614164474putative MarR-family transcriptional regulatorQuickGO ontologyBLASTP
6142406153281089Epoxide hydrolaseQuickGO ontologyBLASTP
6153256171301806Putative carboxylesteraseQuickGO ontologyBLASTP
617192617935744hypothetical protein
617982618569588conserved hypothetical protein putative DNA-glycosylase domainQuickGO ontologyBLASTP
618643619059417Putative transposaseQuickGO ontologyBLASTP
6190356202941260Putative multidrug resistance proteinQuickGO ontologyBLASTP
621194621616423hypothetical protein
621916622140225hypothetical proteinBLASTP
622164622292129hypothetical proteinBLASTP
6224086238471440hypothetical proteinBLASTP
624133625059927putative oxidoreductaseQuickGO ontologyBLASTP
625168625779612putative tetR-family transcriptional regulatorQuickGO ontologyBLASTP
625915626319405hypothetical proteinBLASTP
626535627248714Putative short-chain type dehydrogenasereductase partialQuickGO ontologyBLASTP
627504628058555putative TetR-family transcriptional regulatorQuickGO ontology
628242628706465hypothetical proteinBLASTP
628875629660786putative hydrolaseQuickGO ontologyBLASTP
6297046312361533Putative transmembrane transport proteinQuickGO ontologyBLASTP
631207631884678putative transmembrane oxidoreductaseQuickGO ontology
6324426346762235hypothetical protein putative membrane proteinQuickGO ontology
634673634954282Putative PadR family transcriptional regulatorQuickGO ontology