Pre_GI Gene

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Host: NC_013929 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013929:5850599 Streptomyces scabiei 87.22 chromosome, complete genome

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
585059958522691671mobilisation relaxase componentQuickGO ontologyBLASTP
58522665852952687mobilisation proteinQuickGO ontologyBLASTP
58530385853892855hypothetical proteinBLASTP
585411258551821071hypothetical proteinBLASTP
58554925855632141hypothetical proteinBLASTP
58562705856479210hypothetical proteinBLASTP
58564805857370891hypothetical proteinBLASTP
585744558590911647transposaseQuickGO ontologyBLASTP
58591125859885774IstB-like ATPaseQuickGO ontologyBLASTP
58598955860725831hypothetical proteinBLASTP
58609815861418438hypothetical proteinBLASTP
5861971586204373tRNA-ArgQuickGO ontology
586226458635351272ABC transporter ATP-binding proteinQuickGO ontologyBLASTP
58635395864354816hypothetical proteinBLASTP
58643515865322972ABC transporterQuickGO ontologyBLASTP
58653745866114741TetR family transcriptional regulatorQuickGO ontologyBLASTP
586625558680181764IclR family transcriptional regulatorQuickGO ontologyBLASTP
586830558696631359hypothetical proteinBLASTP
58699355870588654transcriptional regulatorQuickGO ontologyBLASTP