Pre_GI: BLASTP Hits

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Query: NC_012917:569856:585725 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 585725, End: 587476, Length: 1752

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004547:667988:6909186909186926511734Erwinia carotovora subsp. atroseptica SCRI1043, complete genomethiol:disulfide interchange protein precursor01023
NC_012912:4012112:4013884401388440156021719Dickeya zeae Ech1591, complete genomecytochrome c biogenesis protein transmembrane region0669
NC_017154:331921:3511873511873529741788Yersinia pestis D106004 chromosome, complete genomethiol:disulfide interchange protein0668
NC_006155:456000:4763734763734781601788Yersinia pseudotuberculosis IP 32953, complete genomethiol:disulfide interchange protein precursor0667
NC_005810:515744:5358245358245376111788Yersinia pestis biovar Microtus str. 91001, complete genomethiol:disulfide interchange protein precursor0666
AP010958:5090696:5120677512067751223741698Escherichia coli O103:H2 str. 12009 DNA, complete genomefused thiol: disulfide interchange protein: activator of DsbC/conserved protein0658
CU928145:4792703:4808917480891748106141698Escherichia coli 55989 chromosome, complete genomefused thiol:disulfide interchange protein: activator of DsbC ; conserved hypothetical protein0658
NC_011748:4792703:4808917480891748106141698Escherichia coli 55989, complete genomethiol:disulfide interchange protein precursor0658
NC_013353:5090696:5120677512067751223741698Escherichia coli O103:H2 str. 12009, complete genomefused thiol: disulfide interchange protein: activator of DsbC/hypothetical protein0658
NC_004431:4955658:4972379497237949740761698Escherichia coli CFT073, complete genomethiol:disulfide interchange protein precursor0658
NC_012880:3982383:3984099398409939858111713Dickeya dadantii Ech703, complete genomecytochrome c biogenesis protein transmembrane region0658
NC_011745:4862218:4881993488199348836901698Escherichia coli ED1a chromosome, complete genomethiol:disulfide interchange protein0658
NC_009832:426993:4521354521354538201686Serratia proteamaculans 568, complete genomeProtein-disulfide reductase0657
NC_013592:577831:5929225929225946701749Dickeya dadantii Ech586, complete genomecytochrome c biogenesis protein transmembrane region0651
NC_020211:379000:3981603981603998841725Serratia marcescens WW4, complete genomethiol:disulfide interchange protein0650
NC_011080:4543000:4566791456679145684941704Salmonella enterica subsp. enterica serovar Newport str. SL254,thiol:disulfide interchange protein DsbD0648
NC_011147:4297513:4312808431280843145111704Salmonella enterica subsp. enterica serovar Paratyphi A strthiol:disulfide interchange protein0648
NC_011205:4564645:4579895457989545815981704Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853thiol:disulfide interchange protein precursor0647
NC_011294:4409137:4422676442267644243791704Salmonella enterica subsp. enterica serovar Enteritidis strthiol:disulfide interchange protein0647
NC_016831:4367000:4380725438072543824281704Salmonella enterica subsp. enterica serovar Gallinarum/pullorumthiol:disulfide interchange protein DsbD0647
NC_003197:4551880:4567382456738245690851704Salmonella typhimurium LT2, complete genomethiol:disulfide interchange protein precursor0646
NC_016810:4573172:4587963458796345896661704Salmonella enterica subsp. enterica serovar Typhimurium strthiol:disulfide interchange protein DsbD0646
NC_016856:4563435:4580213458021345819161704Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sthiol:disulfide interchange protein0646
NC_016857:4573173:4587964458796445896671704Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74thiol:disulfide interchange protein0646
NC_016860:4649274:4664776466477646664791704Salmonella enterica subsp. enterica serovar Typhimurium strthiol:disulfide interchange protein0646
NC_016863:4513106:4527819452781945295221704Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1thiol:disulfide interchange protein0646
NC_017046:4571833:4586624458662445883271704Salmonella enterica subsp. enterica serovar Typhimurium str. 798thiol:disulfide interchange protein DsbD0646
NC_003198:4513900:4543876454387645455791704Salmonella enterica subsp. enterica serovar Typhi str. CT18,thiol:disulfide interchange protein precursor0646
NC_010067:3204682:3204682320468232063851704Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein0646
NC_011274:4385039:4400580440058044022831704Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91thiol:disulfide interchange protein0646
NC_006905:4486433:4502083450208345037861704Salmonella enterica subsp. enterica serovar Choleraesuis strthiol:disulfide interchange protein precursor0642
NC_015761:4188250:4215962421596242176651704Salmonella bongori NCTC 12419, complete genomethiol:disulfide interchange protein DsbD0642
NC_015663:1902344:1927238192723819289621725Enterobacter aerogenes KCTC 2190 chromosome, complete genomethiol:disulfide interchange protein0639
NC_013956:455000:4671364671364688301695Pantoea ananatis LMG 20103 chromosome, complete genomeDsbD4e-179628
NC_021066:3703725:3705420370542037072221803Raoultella ornithinolytica B6, complete genomethiol:disulfide interchange protein precursor7e-178624
NC_014618:4312295:4315600431560043173181719Enterobacter cloacae SCF1 chromosome, complete genomeProtein-disulfide reductase7e-178624
NC_013850:4993307:5017594501759450193901797Klebsiella variicola At-22 chromosome, complete genomecytochrome c biogenesis protein transmembrane region2e-176619
NC_011283:5170683:5195534519553451973301797Klebsiella pneumoniae 342 chromosome, complete genomethiol:disulfide interchange protein3e-176618
NC_013961:3269368:3272548327254832742631716Erwinia amylovora, complete genomethiol:disulfide interchange protein DsbD5e-176617
NC_005126:4824500:4828928482892848306551728Photorhabdus luminescens subsp. laumondii TTO1, complete genomethiol:disulfide interchange protein precursor1e-174613
NC_007712:532500:5468225468225485941773Sodalis glossinidius str. 'morsitans', complete genomethiol-disulfide interchange protein2e-171602
NC_014541:475350:5289695289695307381770Ferrimonas balearica DSM 9799 chromosome, complete genomecytochrome c biogenesis protein transmembrane region7e-101368
NC_009850:2169459:2186381218638121881381758Arcobacter butzleri RM4018, complete genomethiol:disulfide interchange protein DsbD7e-72271
NC_015740:2692023:2710392271039227121581767Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completethiol:disulfide interchange protein4e-68259
NC_009434:3611738:3659254365925436610171764Pseudomonas stutzeri A1501, complete genomethiol:disulfide interchange protein precursor1e-66254
NC_015850:548821:5611945611945630591866Acidithiobacillus caldus SM-1 chromosome, complete genomecytochrome c-type biogenesis protein DsbD, protein-disulfide reductase7e-66252
NC_015850:1947000:1952906195290619547711866Acidithiobacillus caldus SM-1 chromosome, complete genomecytochrome c-type biogenesis protein DsbD, protein-disulfide reductase7e-66252
NC_002947:4805060:4808445480844548101601716Pseudomonas putida KT2440, complete genomethiol:disulfide interchange protein DsbD2e-65251
NC_009439:794498:7944987944987962851788Pseudomonas mendocina ymp, complete genomethiol:disulfide interchange protein precursor1e-64248
NC_015850:1060000:1066639106663910685551917Acidithiobacillus caldus SM-1 chromosome, complete genomecytochrome c-type biogenesis protein DsbD, protein-disulfide reductase4e-62239
NC_012808:1220378:1262514126251412642531740Methylobacterium extorquens AM1, complete genomeputative fused thiol:disulfide interchange protein precursor2e-60234
NC_012988:670101:6868336868336886051773Methylobacterium extorquens DM4, complete genomefused thiol:disulfide interchange protein5e-59229
NC_015942:763500:7779567779567795061551Acidithiobacillus ferrivorans SS3 chromosome, complete genomecytochrome c biogenesis protein transmembrane region2e-46187
NC_010995:3197686:3217795321779532196121818Cellvibrio japonicus Ueda107, complete genomec-type cytochrome biogenesis protein4e-30133
NC_018604:1263927:1286465128646512881741710Brachyspira pilosicoli WesB complete genomethiol disulfide interchange protein6e-1996.3
NC_010688:605018:6050186050186073242307Xanthomonas campestris pv. campestris, complete genomehypothetical protein1e-1895.5
NC_007086:626891:6268916268916291972307Xanthomonas campestris pv. campestris str. 8004, complete genomec-type cytochrome biogenesis protein1e-1895.5
NC_003902:624828:6248286248286271342307Xanthomonas campestris pv. campestris str. ATCC 33913, completec-type cytochrome biogenesis protein1e-1895.5
NC_010170:4800000:4840287484028748414741188Bordetella petrii, complete genomePutative Thiol:disulfide interchange protein7e-1892.4
NC_019908:463281:4646654646654663741710Brachyspira pilosicoli P43/6/78 chromosome, complete genomethiol disulfide interchange protein8e-1892.4
NC_014330:169862:1916621916621933711710Brachyspira pilosicoli 95/1000 chromosome, complete genomethiol disulfide interchange protein1e-1792
NC_018607:1505908:1522157152215715238721716Brachyspira pilosicoli B2904 chromosome, complete genomethiol disulfide interchange protein7e-1686.3
NC_008571:3165143:3179924317992431819662043Gramella forsetii KT0803, complete genomethiol:disulfide interchange protein DsbD 22e-1171.2
NC_007645:3688000:3695752369575236979112160Hahella chejuensis KCTC 2396, complete genomeThiol:disulfide interchange protein4e-1170.5
NC_014033:1664500:1689845168984516918061962Prevotella ruminicola 23 chromosome, complete genomeputative thiol:disulfide interchange protein6e-1169.7
NC_010995:3745957:3749844374984437519012058Cellvibrio japonicus Ueda107, complete genomethiol-disulfide interchange protein DsbD homolog1e-1068.9
NC_015164:2626503:2629526262952626315231998Bacteroides salanitronis DSM 18170 chromosome, complete genomeProtein-disulfide reductase6e-1066.2
NC_007712:1262593:1285352128535212873552004Sodalis glossinidius str. 'morsitans', complete genomesuppressor for copper-sensitivity B3e-0964.3
NC_013209:2248119:2292926229292622951182193Acetobacter pasteurianus IFO 3283-01, complete genomecytochrome c biogenesis thiol:disulfide interchange protein DsbD3e-0963.9
NC_008609:142471:158146158146158529384Pelobacter propionicus DSM 2379, complete genomeThioredoxin domain4e-0757
NC_016628:1:1624616246182642019Vibrio furnissii NCTC 11218 chromosome 2, complete sequencecytochrome c biogenesis protein, transmembrane region1e-0655.1
NC_017025:1761918:178158917815891782029441Flavobacterium indicum GPTSA100-9, complete genomeThioredoxin family protein2e-0654.7