Pre_GI: BLASTP Hits

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Query: NC_011283:1178500:1183952 Klebsiella pneumoniae 342 chromosome, complete genome

Start: 1183952, End: 1184521, Length: 570

Host Lineage: Klebsiella pneumoniae; Klebsiella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Klebsiella pneumoniae 342 was isolated from the stem tissue of Zea mays. This strain fixes atmospheric nitrogen and may be able to provide nitrogen, in the form of ammonia, to plant cells. This organism is the most medically important organism within the genus Klebsiella. It is an environmental organism found in water, soil, and on the surface of plants. Several strains have been isolated from plant tissues and are nitrogen-fixing endophytes that may be a source of nitrogen for the plant. Other strains can become opportunistic pathogens which infect humans, and typically causes hospital-acquired infections in immunocompromised patients. Major sites of infection include the lungs, where it causes a type of pneumonia, and urinary tract infections. Klebsiella can also enter the bloodstream (bacterimia) and cause sepsis. The pathogen can also infect animals and cause inflammation of the uterus in horses as well as more generalized infections in other mammals. This organism expresses numerous pathogenicity factors, including multiple adhesins, capsular polysaccharide, siderophores, and lipopolysaccharide for the evasion of host defenses. The multiple antibiotic resistance genes carried on the chromosome inhibit efforts to clear the organism from infected patients via antibiotic use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014121:4043198:405680640568064057378573Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein9e-57219
NC_014328:2518081:253808325380832538637555Clostridium ljungdahlii ATCC 49587 chromosome, complete genomehypothetical protein2e-1788.6
NC_013510:747042:762300762300762866567Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, XRE family4e-1684.3
NC_020126:7285452:729938772993877299959573Myxococcus stipitatus DSM 14675, complete genomeXRE family transcriptional regulator2e-1582.4
NC_019673:3253650:325551432555143256071558Saccharothrix espanaensis DSM 44229 complete genomeTranscriptional regulator, XRE family7e-1580.1
NC_009089:1283000:131939013193901319941552Clostridium difficile 630, complete genomeputative transcriptional regulator1e-1479.3
NC_009617:4805413:480886648088664809417552Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeXRE family transcriptional regulator4e-1477.8
NC_004557:1553000:155369415536941554401708Clostridium tetani E88, complete genomeputative transcriptional regulatory protein9e-1476.6
NC_009617:1487110:149075414907541491308555Clostridium beijerinckii NCIMB 8052 chromosome, complete genomehelix-turn-helix domain-containing protein2e-1375.5
NC_014532:1481787:150309715030971503672576Halomonas elongata DSM 2581, complete genomehypothetical protein4e-1374.3
NC_013947:4363250:437654343765434377166624Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, XRE family4e-1374.3
NC_020063:3690308:373506937350693735671603Enterobacteriaceae bacterium strain FGI 57, complete genomeputative transcriptional regulator5e-1373.9
NC_015379:3736500:375449337544933755095603Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, Xre family7e-1373.6
NC_016830:3230939:323805032380503238652603Pseudomonas fluorescens F113 chromosome, complete genomecro ci family transcriptional regulator7e-1373.6
NC_007907:4956500:498991149899114990465555Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-1272.4
NC_010067:3538169:353816935381693538783615Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-1272
NC_010167:1287000:1290803129080312927551953Brucella suis ATCC 23445 chromosome II, complete sequencehypothetical protein2e-1271.6
NC_010103:1777000:1780871178087117828231953Brucella canis ATCC 23365 chromosome I, complete sequencehypothetical protein2e-1271.6
NC_010742:1794000:1797845179784517997971953Brucella abortus S19 chromosome 1, complete sequencetranscriptional regulator, Cro/CI family3e-1271.6
NC_006932:1795500:1799556179955618015081953Brucella abortus biovar 1 str. 9-941 chromosome I, completetranscriptional regulator, Cro/CI family3e-1271.6
NC_014121:4577324:458073445807344581336603Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein4e-1271.2
NC_013235:464049:465497465497466090594Nakamurella multipartita DSM 44233, complete genometranscriptional regulator, XRE family4e-1271.2
NC_016818:3887000:391853439185343919082549Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeputative transcriptional regulator3e-1271.2
NC_009953:2808288:281348928134892814016528Salinispora arenicola CNS-205 chromosome, complete genomeXRE family transcriptional regulator6e-1270.5
NC_014960:1697818:171901417190141719634621Anaerolinea thermophila UNI-1, complete genomehypothetical protein9e-1269.7
NC_020064:2728569:273358927335892734137549Serratia marcescens FGI94, complete genomeputative transcriptional regulator3e-1168.6
NC_015434:3507059:352202535220253522603579Verrucosispora maris AB-18-032 chromosome, complete genomeXRE family transcriptional regulator4e-1167.8
NC_020064:79422:976759767598283609Serratia marcescens FGI94, complete genomeputative transcriptional regulator4e-1167.8
NC_004310:1777721:1782720178272017846481929Brucella suis 1330 chromosome I, complete sequencetranscriptional regulator, Cro/CI family5e-1167.4
NC_015857:1809500:1813481181348118154091929Brucella pinnipedialis B2/94 chromosome chromosome 1, completeCro/CI family transcriptional regulator5e-1167.4
NC_007618:1792500:1796708179670817986361929Brucella melitensis biovar Abortus 2308 chromosome I, completeSAM (and some other nucleotide) binding motif:Helix-turn-helix motif5e-1167.4
NC_012660:4149487:415199341519934152619627Pseudomonas fluorescens SBW25 chromosome, complete genomeputative DNA binding protein1e-1066.2
NC_007948:4558000:460677746067774607370594Polaromonas sp. JS666, complete genometranscriptional regulator, XRE family4e-1064.3
NC_014624:1369642:137228713722871372838552Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein6e-1063.9
NC_016816:4129299:415585641558564156458603Pantoea ananatis LMG 5342, complete genomeB3/4 domain-containing protein6e-1063.9
NC_015138:693865:707847707847708416570Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completehelix-turn-helix domain-containing protein8e-1063.5
NC_011149:1429523:144464314446431445245603Salmonella enterica subsp. enterica serovar Agona str. SL483,transcriptional regulator, Cro/CI family1e-0963.2
NC_016516:2314115:232039223203922320976585Propionibacterium acnes TypeIA2 P.acn33 chromosome, completecupin domain protein1e-0962.8
NC_016511:2321999:232953423295342330118585Propionibacterium acnes TypeIA2 P.acn31 chromosome, completecupin domain protein1e-0962.8
NC_016512:2322598:232886723288672329460594Propionibacterium acnes TypeIA2 P.acn17 chromosome, completecupin domain protein1e-0962.8
NC_020063:4653422:466162746616274662175549Enterobacteriaceae bacterium strain FGI 57, complete genomeputative transcriptional regulator2e-0962.4
NC_006085:2384892:239089723908972391763867Propionibacterium acnes KPA171202, complete genomeputative transcriptional regulator2e-0962.4
NC_014039:2320307:232631423263142327180867Propionibacterium acnes SK137 chromosome, complete genomecupin domain protein2e-0962.4
NC_011757:517000:548476548476549072597Methylobacterium chloromethanicum CM4, complete genometranscriptional regulator, XRE family2e-0962
NC_004631:1623511:162855816285581629160603Salmonella enterica subsp. enterica serovar Typhi Ty2, completeconserved hypothetical DNA-binding protein3e-0961.6
NC_003198:1336894:135202213520221352624603Salmonella enterica subsp. enterica serovar Typhi str. CT18,conserved hypothetical DNA-binding protein3e-0961.6
NC_011094:1726000:173106917310691731671603Salmonella enterica subsp. enterica serovar Schwarzengrund strtranscriptional regulator, Cro/CI family protein3e-0961.6
NC_011080:1750000:175424417542441754846603Salmonella enterica subsp. enterica serovar Newport str. SL254,transcriptional regulator, Cro/CI family3e-0961.6
NC_013406:3650300:365837636583763658936561Paenibacillus sp. Y412MC10 chromosome, complete genomeXRE family transcriptional regulator3e-0961.6
NC_003197:1753663:175788917578891758491603Salmonella typhimurium LT2, complete genomeputative transcriptional regulator3e-0961.2
NC_006511:1273162:128828112882811288883603Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCconserved hypothetical DNA-binding protein3e-0961.2
NC_011147:1267005:128212412821241282726603Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein3e-0961.2
NC_016810:1709695:171474217147421715344603Salmonella enterica subsp. enterica serovar Typhimurium strDNA-binding protein3e-0961.2
NC_016856:1763640:176786617678661768468603Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative transcriptional regulator3e-0961.2
NC_016857:1709695:171474217147421715344603Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative transcriptional regulator3e-0961.2
NC_016860:1752000:175558017555801756182603Salmonella enterica subsp. enterica serovar Typhimurium strputative transcriptional regulator3e-0961.2
NC_016863:1711832:171605817160581716660603Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative transcriptional regulator3e-0961.2
NC_017046:1709578:171462517146251715227603Salmonella enterica subsp. enterica serovar Typhimurium str. 798DNA-binding protein3e-0961.2
NC_008701:391216:3967843967843983341551Pyrobaculum islandicum DSM 4184, complete genometranscriptional regulator, XRE family3e-0961.2
NC_003296:1665569:167175816717581672375618Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePUTATIVE DNA-BINDING TRANSCRIPTIONAL REGULATORY TRANSCRIPTION REGULATOR PROTEIN5e-0960.8
NC_003296:1696958:170194817019481702565618Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePUTATIVE TRANSCRIPTION REGULATOR PROTEIN5e-0960.8
NC_009380:3903392:390735439073543908001648Salinispora tropica CNB-440 chromosome, complete genomecupin4e-0960.8
NC_006905:1766000:177105217710521771654603Salmonella enterica subsp. enterica serovar Choleraesuis strputative transcriptional regulator9e-0960.1
NC_013729:2258582:225858222585822259178597Kribbella flavida DSM 17836, complete genometranscriptional regulator, XRE family1e-0859.3
NC_008148:2498000:252032625203262520988663Rubrobacter xylanophilus DSM 9941, complete genometranscriptional regulator, XRE family with cupin sensor2e-0859.3
NC_012808:2886282:289424728942472894843597Methylobacterium extorquens AM1, complete genomeputative transcriptional regulator, XRE family2e-0859.3
NC_012108:946314:962372962372962944573Desulfobacterium autotrophicum HRM2, complete genometranscriptional regulator (Cro/CI family protein)2e-0858.9
NC_015573:2463123:248380024838002484105306Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehelix-turn-helix domain-containing protein3e-0858.2
NC_009253:897684:951074951074951394321Desulfotomaculum reducens MI-1 chromosome, complete genomeXRE family transcriptional regulator3e-0858.2
NC_016885:417661:4347374347374362871551Pyrobaculum oguniense TE7 chromosome, complete genomeputative transcriptional regulator3e-0858.2
NC_015566:2328771:233006823300682330631564Serratia sp. AS12 chromosome, complete genomehelix-turn-helix domain-containing protein3e-0858.2
NC_015567:2328782:233007923300792330642564Serratia sp. AS9 chromosome, complete genomehelix-turn-helix domain-containing protein3e-0858.2
NC_010175:2925084:294094629409462941581636Chloroflexus aurantiacus J-10-fl, complete genomeCupin 2 conserved barrel domain protein8e-0857
NC_012032:2925000:293613129361312936766636Chloroflexus sp. Y-400-fl, complete genometranscriptional regulator, XRE family8e-0857
NC_009253:897684:945674945674946330657Desulfotomaculum reducens MI-1 chromosome, complete genomeXRE family transcriptional regulator7e-0857
NC_009253:897684:946674946674947330657Desulfotomaculum reducens MI-1 chromosome, complete genomeXRE family transcriptional regulator1e-0756.2
NC_016025:552000:561697561697562284588Candidatus Chloracidobacterium thermophilum B chromosome chromosomeputative transcriptional regulator2e-0755.8
NC_012522:7837071:785901578590157859641627Rhodococcus opacus B4, complete genomehypothetical protein4e-0754.7
NC_014721:2135500:215777821577782158167390Caldicellulosiruptor kristjanssonii 177R1B chromosome, completehelix-turn-helix domain protein5e-0754.3
NC_014721:2135500:215748921574892157689201Caldicellulosiruptor kristjanssonii 177R1B chromosome, completehelix-turn-helix domain protein5e-0753.9
NC_011773:1277606:130510913051091305432324Bacillus cereus AH820 chromosome, complete genometranscriptional regulator SinR6e-0753.9
NC_014158:1479313:148582814858281486439612Tsukamurella paurometabola DSM 20162 chromosome, complete genometranscriptional regulator, XRE family7e-0753.5
NC_015931:134601:142997142997143593597Pyrolobus fumarii 1A, complete genomeXRE family transcriptional regulator8e-0753.5
NC_015723:2116090:211951321195132120103591Cupriavidus necator N-1 chromosome 2, complete sequenceN-carbamoyl-L-amino acid hydrolase AmaB1e-0653.1
NC_014318:3691:2038620386215371152Amycolatopsis mediterranei U32 chromosome, complete genomeXRE family transcriptional regulator9e-0753.1
NC_017186:3694:2038620386215371152Amycolatopsis mediterranei S699 chromosome, complete genomeXRE family transcriptional regulator9e-0753.1
NC_017273:352150:357368357368357946579Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, completecupin1e-0652.8
NC_014010:1850500:188064418806441881270627Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeDNA-binding protein1e-0652.8
NC_016645:279232:3038763038763054201545Pyrobaculum sp. 1860 chromosome, complete genometranscriptional regulator, XRE family1e-0652.8
NC_015589:712626:735469735469736083615Desulfotomaculum ruminis DSM 2154 chromosome, complete genomehelix-turn-helix domain-containing protein2e-0652.4
NC_013939:1535071:155165715516571552193537Deferribacter desulfuricans SSM1, complete genomeXRE family transcriptional regulator2e-0652
NC_015376:3320818:335258433525843353144561Burkholderia gladioli BSR3 chromosome chromosome 2, completetranscriptional regulator, XRE family2e-0652
NC_006510:2910000:291967829196782920220543Geobacillus kaustophilus HTA426, complete genomehypothetical protein2e-0652
NC_007645:5801295:580985358098535810188336Hahella chejuensis KCTC 2396, complete genomepredicted transcriptional regulator3e-0651.6
NC_015563:3979500:399881739988173999386570Delftia sp. Cs1-4 chromosome, complete genomehelix-turn-helix domain-containing protein3e-0651.6
NC_014652:420457:457158457158457475318Caldicellulosiruptor hydrothermalis 108 chromosome, completetranscriptional regulator, xre family4e-0651.2
NC_013929:3299736:330737133073713307766396Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein4e-0651.2
NC_009253:897684:948103948103948735633Desulfotomaculum reducens MI-1 chromosome, complete genomeXRE family transcriptional regulator6e-0650.4
NC_014958:629459:651346651346651735390Deinococcus maricopensis DSM 21211 chromosome, complete genomehelix-turn-helix domain-containing protein8e-0650.1
NC_012808:4137000:413802541380254138288264Methylobacterium extorquens AM1, complete genomehypothetical protein9e-0650.1
NC_018524:301992:319448319448320035588Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomehelix-turn-helix family protein9e-0650.1
NC_001263:2574755:257665625766562577051396Deinococcus radiodurans R1 chromosome 1, complete sequencetranscriptional regulator, HTH_3 family9e-0650.1