Pre_GI: BLASTP Hits

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Query: NC_011094:638552:664550 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 664550, End: 665164, Length: 615

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015761:1017301:102522610252261025840615Salmonella bongori NCTC 12419, complete genomebacteriophage protein1e-102371
NC_015663:4522109:452715045271504527779630Enterobacter aerogenes KCTC 2190 chromosome, complete genomelytic enzyme6e-68256
NC_020181:5217000:522775752277575228383627Enterobacter aerogenes EA1509E, complete genomehypothetical protein7e-67253
NC_012731:2083650:211163421116342112260627Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative glycoside hydrolase3e-63240
NC_009648:1541699:156536715653671565993627Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative glycoside hydrolase7e-62236
NC_013850:2182337:220954522095452210171627Klebsiella variicola At-22 chromosome, complete genomeglycoside hydrolase family 197e-62236
NC_012214:1974500:198840819884081989031624Erwinia pyrifoliae Ep1/96, complete genomeLytic enzyme8e-62236
NC_011601:2806392:281283928128392813465627Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeendolysin4e-58224
NC_020181:5384015:539721353972135397842630Enterobacter aerogenes EA1509E, complete genomePhage endolysin1e-57222
NC_013282:1804909:182501118250111825565555Cronobacter turicensis, complete genomehypothetical protein1e-53209
NC_014121:1682638:169633316963331696881549Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completelytic enzyme6e-53206
NC_016612:3314846:333598533359853336533549Klebsiella oxytoca KCTC 1686 chromosome, complete genomelytic enzyme2e-52205
NC_017047:1906000:191830019183001918926627Rahnella aquatilis HX2 chromosome, complete genomeputative endolysin5e-46184
NC_013282:1200993:122515912251591225785627Cronobacter turicensis, complete genomeUncharacterized protein HI14152e-42171
NC_011770:1431740:145211114521111452728618Pseudomonas aeruginosa LESB58, complete genomeCOG3179: Predicted chitinase4e-35147
NC_011094:1923870:194398219439821944269288Salmonella enterica subsp. enterica serovar Schwarzengrund strlytic enzyme6e-32137
NC_011205:1391971:140140014014001401687288Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853lytic enzyme8e-32136
NC_011770:860944:881683881683882300618Pseudomonas aeruginosa LESB58, complete genomePredicted chitinase; lytic protein2e-31135
NC_010067:2304313:232964023296402329939300Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-29128
NC_018607:2010500:201515420151542015747594Brachyspira pilosicoli B2904 chromosome, complete genomeglycoside hydrolase3e-26118
NC_019908:807000:812628812628813203576Brachyspira pilosicoli P43/6/78 chromosome, complete genomeglycoside hydrolase family protein1e-25116
NC_016860:1943203:196163519616351961865231Salmonella enterica subsp. enterica serovar Typhimurium strlytic enzyme3e-25114
NC_016810:1903426:192366219236621923892231Salmonella enterica subsp. enterica serovar Typhimurium str3e-25114
NC_010102:1137247:115165111516511151881231Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-25114
NC_012912:325913:332536332536333162627Dickeya zeae Ech1591, complete genomeglycoside hydrolase family 193e-25114
NC_016863:1905454:192569019256901925977288Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein6e-25114
NC_016857:1903426:192366219236621923949288Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74lytic enzyme6e-25114
NC_016856:1957263:197749919774991977786288Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein6e-25114
NC_003197:1945858:196609419660941966381288Salmonella typhimurium LT2, complete genomehypothetical protein6e-25114
NC_017243:58000:613536135361964612Brachyspira intermedia PWS/A chromosome, complete genomeglycoside hydrolase8e-25113
NC_020054:4983691:498793949879394988610672Fibrella aestuarina BUZ 2 drat genomeputative chitinase3e-24111
NC_018604:305957:314155314155314781627Brachyspira pilosicoli WesB complete genomeglycoside hydrolase family 191e-23109
NC_010943:3034366:3037592303759230385961005Stenotrophomonas maltophilia K279a, complete genomeputative bacteriophage protein1e-23109
NC_014150:2560475:256367625636762564269594Brachyspira murdochii DSM 12563 chromosome, complete genomeglycoside hydrolase family 192e-23108
NC_014150:1936154:193923519392351939828594Brachyspira murdochii DSM 12563 chromosome, complete genomeglycoside hydrolase family 193e-23108
NC_014150:1497381:150134615013461501939594Brachyspira murdochii DSM 12563 chromosome, complete genomeglycoside hydrolase family 193e-23108
NC_013592:4295449:431316143131614313787627Dickeya dadantii Ech586, complete genomeglycoside hydrolase family 195e-23107
NC_011071:2733438:2736843273684327378501008Stenotrophomonas maltophilia R551-3, complete genomechitinase-like protein9e-23106
NC_014330:1324500:133383613338361334414579Brachyspira pilosicoli 95/1000 chromosome, complete genomeendolysin glycoside hydrolase2e-22105
NC_019908:1886647:189339118933911893969579Brachyspira pilosicoli P43/6/78 chromosome, complete genomeendolysin glycoside hydrolase2e-22105
NC_018604:2871328:288056228805622881140579Brachyspira pilosicoli WesB complete genomeendolysin glycoside hydrolase2e-22105
NC_018607:2747462:275671727567172757295579Brachyspira pilosicoli B2904 chromosome, complete genomeendolysin glycoside hydrolase3e-22104
NC_017025:1761918:176969117696911770404714Flavobacterium indicum GPTSA100-9, complete genomeGlycoside hydrolase family 19, putative chitinase6e-22103
NC_015947:2752450:2755845275584527568521008Burkholderia sp. JV3 chromosome, complete genomeglycoside hydrolase family protein8e-22103
NC_014150:1607873:162002416200241620638615Brachyspira murdochii DSM 12563 chromosome, complete genomeglycoside hydrolase family 198e-22103
NC_014330:1593000:159658415965841597099516Brachyspira pilosicoli 95/1000 chromosome, complete genomeputative Lys-endolysin; glycoside hydrolase3e-21101
NC_012660:4558122:457641545764154576948534Pseudomonas fluorescens SBW25 chromosome, complete genomeputative phage encoded lysozyme4e-21100
NC_017243:1734179:174576917457691746251483Brachyspira intermedia PWS/A chromosome, complete genomeendolysin glycoside hydrolase4e-1994.4
NC_004578:4432983:444604244460424446575534Pseudomonas syringae pv. tomato str. DC3000, complete genomelysozyme, putative1e-1789.4
NC_004578:3817330:383103838310383831583546Pseudomonas syringae pv. tomato str. DC3000, complete genomelysozyme, putative2e-1788.6
NC_009255:1369200:138805713880571388635579Burkholderia vietnamiensis G4 chromosome 2, complete sequenceglycoside hydrolase family protein8e-1787
NC_005773:2177184:218310721831072183652546Pseudomonas syringae pv. phaseolicola 1448A, complete genomeprophage PSPPH02, putative chitinase3e-1685.1
NC_003902:3514000:353599035359903536631642Xanthomonas campestris pv. campestris str. ATCC 33913, completephage-related lytic enzyme9e-1683.6
NC_004129:2234851:224007122400712240622552Pseudomonas fluorescens Pf-5, complete genomepyocin R2_PP, lytic enzyme2e-1582.4
NC_010002:3785313:378740737874073787958552Delftia acidovorans SPH-1, complete genomeputative lysozyme2e-1582
NC_003047:3419212:3435808343580834377271920Sinorhizobium meliloti 1021, complete genomePUTATIVE PROTEASE TRANSMEMBRANE PROTEIN4e-1581.3
NC_014168:1724993:1731346173134617328481503Segniliparus rotundus DSM 44985 chromosome, complete genomefamily 19 glycoside hydrolase8e-1580.1
NC_014500:4691915:4699276469927647015822307Dickeya dadantii 3937 chromosome, complete genomeEF hand domain-containing protein1e-1479.7
NC_016830:4999946:501578150157815016344564Pseudomonas fluorescens F113 chromosome, complete genomepyocin lytic enzyme2e-1478.6
NC_005773:2177184:219379921937992194344546Pseudomonas syringae pv. phaseolicola 1448A, complete genomeprophage PSPPH02, putative chitinase3e-1478.2
NC_010067:2529750:2539587253958725418032217Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-1376.6
NC_015733:1976752:198241519824151982966552Pseudomonas putida S16 chromosome, complete genomepyocin R2_PP, lytic enzyme3e-1375.1
NC_014118:1171411:1179632117963211821632532Burkholderia sp. CCGE1002 chromosome chromosome 2, completechitinase-like protein1e-1170.1
NC_017986:4124335:412990241299024130471570Pseudomonas putida ND6 chromosome, complete genomeglycoside hydrolase family protein2e-1168.9
NC_017162:3817952:3826349382634938284212073Acinetobacter baumannii 1656-2 chromosome, complete genomechitinase4e-1167.8
NC_010611:3771778:3780178378017837821842007Acinetobacter baumannii ACICU, complete genomepredicted chitinase4e-1167.8
NC_016002:2037374:205644220564422056984543Pseudogulbenkiania sp. NH8B, complete genomeglycoside hydrolase family protein1e-1066.6
NC_009937:958576:961972961972962877906Azorhizobium caulinodans ORS 571, complete genomeputative chitinase1e-1066.2
NC_004578:5916711:5924253592425359262772025Pseudomonas syringae pv. tomato str. DC3000, complete genomeEF hand domain protein9e-0960.1
NC_020301:853267:865370865370865978609Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomehypothetical protein7e-0857
NC_016835:1:1327313273157052433Rahnella aquatilis CIP 78.65 = ATCC 33071 plasmid pRahaq201,putative chitinase4e-0754.7
NC_007347:1:2040320403227332331Ralstonia eutropha JMP134 chromosome 1, complete sequencehypothetical protein4e-0754.7
NC_010552:592154:6011786011786038052628Burkholderia ambifaria MC40-6 chromosome 2, complete sequencechitinase-like protein5e-0754.3
NC_009439:101174:1085661085661117303165Pseudomonas mendocina ymp, complete genomeglycoside hydrolase family protein9e-0753.5
NC_014910:1200605:120457012045701204791222Alicycliphilus denitrificans BC chromosome, complete genome3e-0651.6
NC_010161:2548254:255766425576642558245582Bartonella tribocorum CIP 105476, complete genomehypothetical protein7e-0650.4
NC_010161:1949637:195948819594881960069582Bartonella tribocorum CIP 105476, complete genomehypothetical protein7e-0650.4
NC_010161:1324381:133379013337901334371582Bartonella tribocorum CIP 105476, complete genomepeptidoglycan binding protein8e-0650.4
NC_010161:1501758:151116715111671511748582Bartonella tribocorum CIP 105476, complete genomehypothetical protein8e-0650.4