Pre_GI Gene

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Host: NC_016830 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016830:4999946 Pseudomonas fluorescens F113 chromosome, complete genome

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
499994650010911146protein AroCQuickGO ontologyBLASTP
500112650022171092Chorismate synthaseQuickGO ontologyBLASTP
50023635003325963alphabeta fold family hydrolaseQuickGO ontologyBLASTP
50034335004221789hypothetical protein
50043895005297909n5-glutamine s-adenosyl-l-methionine-dependent methyltransferaseQuickGO ontologyBLASTP
50055525006142591isochorismataseQuickGO ontologyBLASTP
50062735006593321hypothetical protein
50066105007224615Smr domain proteinQuickGO ontologyBLASTP
500764150086781038DNA-cytosine methyltransferaseQuickGO ontologyBLASTP
500886750108882022dna mismatch repair proteinQuickGO ontologyBLASTP
501154650128231278protein UmuCQuickGO ontologyBLASTP
50128165013007192protein UmuDQuickGO ontologyBLASTP
50136385014042405Gifsy-2 prophage proteinQuickGO ontologyBLASTP
50143145015108795prophage adenine modification methytransferaseQuickGO ontologyBLASTP
50152575015799543phage proteinQuickGO ontologyBLASTP
50157815016344564pyocin lytic enzymeQuickGO ontologyBLASTP
501641350174591047Phage tail protein DQuickGO ontologyBLASTP
50175235017693171P2-like prophage tail protein XQuickGO ontologyBLASTP
50177045018549846phage protein UQuickGO ontologyBLASTP
501855950211382580Phage tail tape measure proteinQuickGO ontologyBLASTP
50211545021276123hypothetical protein
50212395021565327hypothetical proteinBLASTP
50216325022141510Phage major tail tube proteinQuickGO ontologyBLASTP
502215450233171164Phage tail sheath monomerQuickGO ontologyBLASTP