Pre_GI Gene

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Host: NC_007347 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007347:1 Ralstonia eutropha JMP134 chromosome 1, complete sequence

Host Lineage: Cupriavidus pinatubonensis; Cupriavidus; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism is found in both soil and water and has great potential for use in bioremediation as it is capable of degrading a large list of pollutants including chlorinated aromatic compounds. The bacterium can utilize hydrogen, carbon dioxide, as well as organic compounds for growth and is a model organism for hydrogen oxidation as it can grow on hydrogen as the sole energy source. It was originally isolated due to its ability to degrade the herbicide 2,4-dichlorophenoxyacetic acid, which is due to the degradative functions being encoded on a plasmid (pJP4). Metabolically versatile bacterium. Cupriavidus necator also known as Ralstonia eutropha is a soil bacterium with diverse metabolic abilities. Strains of this organism are resistant to high levels of copper or are able to degrade chloroaromatic compounds such as halobenzoates and nitrophenols making them useful for bioremediation.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
18420191836chromosomal replication initiation proteinQuickGO ontologyBLASTP
239335081116DNA polymerase III subunit betaQuickGO ontologyBLASTP
372662512526DNA gyrase subunit BQuickGO ontologyBLASTP
68707844975RNA-directed DNA polymeraseQuickGO ontologyBLASTP
83229176855hypothetical proteinBLASTP
9666108921227hypothetical protein
1091111750840hypothetical protein
1177212521750HNH endonucleaseQuickGO ontologyBLASTP
1303913368330hypothetical proteinBLASTP
1351814420903Aldoketo reductaseQuickGO ontologyBLASTP
1446815436969regulatory protein LysRLysR substrate-bindingQuickGO ontologyBLASTP
1558416255672hypothetical proteinBLASTP
17474197892316Rhs element Vgr proteinQuickGO ontologyBLASTP
1976120273513hypothetical proteinBLASTP
20403227332331hypothetical proteinBLASTP
2346723727261PAARQuickGO ontologyBLASTP
23730250011272hypothetical proteinBLASTP
24982285963615ImcF-relatedProtein of unknown function DUF1215QuickGO ontologyBLASTP