Pre_GI: BLASTP Hits

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Query: NC_008044:136844:142784 Silicibacter sp. TM1040, complete genome

Start: 142784, End: 143686, Length: 903

Host Lineage: Ruegeria; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This strain was isolated from a culture of the dinoflagellate Pfiesteria piscicida CCMP1830 which has been implicated in many large scale algal blooms resulting in increased mortality in fish. The bacteria are attached to the surface of the dinoflagellate and in some ways allow the dinoflagellate to grow as those lacking the bacteria die off. The bacterium also chemotaxes towards the dinoflagellate product DMSP (dimethylsulfoniopropionate) and metabolizes it. DMSP is a major source of sulfur in marine ecosystems and plays a role in the sulfur biogeochemical cycle. The implication is a tight association between these important dinoflagellates and this marine bacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003911:3453764:346895934689593469858900Silicibacter pomeroyi DSS-3, complete genomehypothetical protein8e-133473
NC_007802:4071006:408656840865684087548981Jannaschia sp. CCS1, complete genomeTwin-arginine translocation pathway signal5e-126450
NC_008209:695269:700873700873701778906Roseobacter denitrificans OCh 114, complete genomehypothetical protein1e-116419
NC_015730:3853065:386899538689953869900906Roseobacter litoralis Och 149 chromosome, complete genomesulfoxide reductase catalytic subunit YedY8e-116416
NC_020911:18500:202942029421202909Octadecabacter antarcticus 307, complete genomeputative molybdopterin-binding oxidoreductase8e-115413
NC_020908:4263552:427801042780104278903894Octadecabacter arcticus 238, complete genomeputative molybdopterin-binding oxidoreductase1e-114412
NC_009952:592000:615171615171616088918Dinoroseobacter shibae DFL 12, complete genomeoxidoreductase molybdopterin binding8e-113406
NC_008686:50750:564285642857324897Paracoccus denitrificans PD1222 chromosome 1, complete sequenceoxidoreductase, molybdopterin binding2e-104379
NC_009049:80184:857638576386668906Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequenceoxidoreductase, molybdopterin binding4e-100364
NC_011916:2967624:298794829879482988889942Caulobacter crescentus NA1000 chromosome, complete genomesulfite oxidase subunit YedY9e-90330
NC_002696:2941644:296196829619682962909942Caulobacter crescentus CB15, complete genomehypothetical protein9e-90330
NC_008782:752686:754112754112755110999Acidovorax sp. JS42, complete genomeoxidoreductase, molybdopterin binding9e-89327
NC_011992:717107:720683720683721681999Acidovorax ebreus TPSY, complete genomeoxidoreductase molybdopterin binding1e-88326
NC_008228:2450700:245370324537032454701999Pseudoalteromonas atlantica T6c, complete genomeoxidoreductase, molybdopterin binding1e-87323
NC_018643:320197:332010332010332903894Alpha proteobacterium HIMB5 chromosome, complete genomemolybdopterin-dependent oxidoreductase2e-87322
NC_015563:1172745:117274511727451173725981Delftia sp. Cs1-4 chromosome, complete genomesulfoxide reductase catalytic subunit yedY7e-86317
NC_008781:708811:708811708811709809999Polaromonas naphthalenivorans CJ2, complete genomeoxidoreductase, molybdopterin binding2e-85315
NC_008009:1264791:127107712710771272033957Acidobacteria bacterium Ellin345, complete genomeSulfite oxidase-like enzyme3e-85315
NC_012968:1191037:119222511922251193223999Methylotenera mobilis JLW8, complete genomeoxidoreductase molybdopterin binding6e-84310
NC_020209:3797830:3811007381100738120201014Pseudomonas poae RE*1-1-14, complete genomeTMAO/DMSO reductase9e-84310
NC_008563:2041345:2046727204672720477311005Escherichia coli APEC O1, complete genomeYedY6e-83307
NC_010498:1210145:1218917121891712199211005Escherichia coli SMS-3-5, complete genomeoxidoreductase, molybdopterin binding1e-82306
CP002516:1902431:1913962191396219149661005Escherichia coli KO11, complete genomeoxidoreductase molybdopterin binding protein1e-82306
CP002185:2181936:2190889219088921918931005Escherichia coli W, complete genomepredicted reductase1e-82306
AP010958:2272919:2278629227862922796331005Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted reductase1e-82306
NC_012967:1967675:1977477197747719784811005Escherichia coli B str. REL606 chromosome, complete genomeputative sulfite oxidase subunit YedY1e-82306
NC_016822:2201388:2216064221606422170681005Shigella sonnei 53G, complete genomeTMAO/DMSO reductase1e-82306
NC_004741:2009769:2018269201826920192731005Shigella flexneri 2a str. 2457T, complete genome1e-82306
NC_008258:2045000:2050260205026020512641005Shigella flexneri 5 str. 8401, complete genome1e-82306
NC_007613:1038000:1052698105269810537021005Shigella boydii Sb227, complete genome2e-82306
NC_013353:2272919:2278629227862922796331005Escherichia coli O103:H2 str. 12009, complete genomereductase1e-82306
NC_016902:1902431:1913962191396219149661005Escherichia coli KO11FL chromosome, complete genomeoxidoreductase molybdopterin binding protein1e-82306
NC_009800:2049346:2058578205857820595821005Escherichia coli HS, complete genomeoxidoreductase, molybdopterin binding1e-82306
NC_013364:2522888:2531437253143725324411005Escherichia coli O111:H- str. 11128, complete genomeputative reductase1e-82306
NC_011741:2091249:2101184210118421021881005Escherichia coli IAI1 chromosome, complete genomeputative sulfite oxidase subunit YedY1e-82306
NC_011415:2248417:2257417225741722584211005Escherichia coli SE11 chromosome, complete genomeputative sulfite oxidase subunit YedY1e-82306
NC_009801:2159123:2168944216894421699481005Escherichia coli E24377A, complete genomeoxidoreductase, molybdopterin binding1e-82306
CU928160:2091249:2101184210118421021881005Escherichia coli IAI1 chromosome, complete genomeexported heme-molybdoenzyme molybdopterin-containing subunit YedY; TAT export1e-82306
NC_013941:2425233:2433804243380424348081005Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein1e-82306
NC_013008:2561586:2570608257060825716121005Escherichia coli O157:H7 str. TW14359 chromosome, complete genomesulfite oxidase subunit YedY1e-82306
NC_011353:2563056:2571627257162725726311005Escherichia coli O157:H7 str. EC4115 chromosome, complete genomesulfite oxidase subunit YedY1e-82306
NC_002695:2655445:2664016266401626650201005Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-82306
NC_012759:1920955:1929985192998519309891005Escherichia coli BW2952 chromosome, complete genomeputative sulfite oxidase subunit YedY3e-82305
NC_012947:1769438:1796855179685517978591005Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completesulfite oxidase subunit YedY3e-82305
AC_000091:2027648:2041615204161520426191005Escherichia coli W3110 DNA, complete genomepredicted reductase2e-82305
NC_000913:2028472:2037502203750220385061005Escherichia coli K12, complete genomehypothetical protein2e-82305
NC_004431:2185750:2191116219111621921201005Escherichia coli CFT073, complete genomehypothetical protein4e-82304
NC_002655:2730659:2739231273923127402351005Escherichia coli O157:H7 EDL933, complete genomehypothetical protein7e-82303
NC_017192:683493:685559685559686518960Arcobacter sp. L, complete genomeoxidoreductase8e-81300
NC_012483:3529895:352989535298953530863969Acidobacterium capsulatum ATCC 51196, complete genomeoxidoreductase, molybdopterin-binding3e-77288
NC_008253:1938975:194464019446401945275636Escherichia coli 536, complete genomehypothetical protein7e-70264
NC_010511:225434:244425244425245393969Methylobacterium sp. 4-46 chromosome, complete genomeputative sulfite oxidase subunit YedY2e-68259
NC_020064:3998715:403672440367244037500777Serratia marcescens FGI94, complete genomesulfite oxidase-like oxidoreductase2e-1686.7
NC_017047:1434500:145411814541181454882765Rahnella aquatilis HX2 chromosome, complete genomeoxidoreductase molybdopterin binding protein4e-1685.9
NC_015061:1481500:150117515011751501939765Rahnella sp. Y9602 chromosome, complete genomeoxidoreductase molybdopterin binding protein4e-1685.9
NC_012779:916000:926829926829927617789Edwardsiella ictaluri 93-146, complete genomehypothetical protein7e-1684.7
NC_020064:3825916:383100238310023831769768Serratia marcescens FGI94, complete genomesulfite oxidase-like oxidoreductase3e-1582.4
NC_014306:4901390:490064249006424901397756Erwinia billingiae Eb661, complete genomeOxidoreductase, molybdopterin binding2e-1480.1
NC_007952:1416000:143200714320071432783777Burkholderia xenovorans LB400 chromosome 2, complete sequenceoxidoreductase, molybdopterin-binding protein3e-1479.7
NC_014307:1855356:188314518831451884143999Ralstonia solanacearum CFBP2957 chromosome, complete genomeoxidoreductase molybdopterin binding9e-1477.8
NC_012914:569471:5911715911715924211251Paenibacillus sp. JDR-2, complete genomeoxidoreductase molybdopterin binding5e-1375.5
NC_013665:2074587:208580120858012086514714Methanocella paludicola SANAE, complete genomehypothetical protein9e-1374.3
NC_014098:1670327:168005516800551680678624Bacillus tusciae DSM 2912 chromosome, complete genomeoxidoreductase molybdopterin binding protein9e-1374.3
NC_008536:1778500:177969517796951780465771Solibacter usitatus Ellin6076, complete genomeoxidoreductase, molybdopterin binding4e-1272
NC_003295:659837:666796666796667569774Ralstonia solanacearum GMI1000, complete genomehypothetical protein5e-1272
NC_020211:1621000:162618316261831626959777Serratia marcescens WW4, complete genomeoxidoreductase molybdopterin binding protein9e-1271.2
NC_014311:2385666:239966623996662400439774Ralstonia solanacearum PSI07 chromosome, complete genomehypothetical protein1e-1170.5
NC_007298:2769525:279244127924412793229789Dechloromonas aromatica RCB, complete genomeOxidoreductase, molybdopterin binding2e-1170.1
NC_011365:1865687:188040018804001881149750Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeoxidoreductase molybdopterin-binding protein2e-1170.1
NC_015856:4203301:422304542230454223818774Collimonas fungivorans Ter331 chromosome, complete genomeoxidoreductase, molybdopterin binding protein2e-1169.7
NC_015422:704500:705141705141705929789Alicycliphilus denitrificans K601 chromosome, complete genomeoxidoreductase molybdopterin binding protein3e-1169.3
NC_014910:755192:765821765821766609789Alicycliphilus denitrificans BC chromosome, complete genomeoxidoreductase molybdopterin binding protein3e-1169.3
NC_014643:535708:5357085357085372641557Rothia dentocariosa ATCC 17931 chromosome, complete genomeoxidoreductase7e-1168.2
NC_016616:134449:162585162585163373789Dechlorosoma suillum PS chromosome, complete genomesulfite oxidase-like oxidoreductase7e-1168.2
NC_003106:1065476:107722010772201077678459Sulfolobus tokodaii str. 7, complete genomehypothetical protein9e-1167.8
NC_012660:2045398:2068951206895120701621212Pseudomonas fluorescens SBW25 chromosome, complete genomeputative cytochrome C dehydrogenase-like protein3e-1065.9
NC_008253:4735418:476869247686924769462771Escherichia coli 536, complete genomehypothetical protein1e-0964.3
NC_004431:3409389:341605634160563416892837Escherichia coli CFT073, complete genomehypothetical protein1e-0964.3
NC_013894:543901:562698562698563291594Thermocrinis albus DSM 14484 chromosome, complete genomeoxidoreductase molybdopterin binding protein2e-0963.2
NC_010505:5583000:5583260558326055843451086Methylobacterium radiotolerans JCM 2831, complete genomeSulfite oxidase3e-0859.7
NC_011892:77975:1085571085571097681212Methylobacterium nodulans ORS 2060 plasmid pMNOD01, completeoxidoreductase molybdopterin binding4e-0858.9
NC_013592:713036:719826719826720596771Dickeya dadantii Ech586, complete genomeoxidoreductase molybdopterin binding protein4e-0858.9
NC_014212:3091571:3112047311204731134441398Meiothermus silvanus DSM 9946 chromosome, complete genomeoxidoreductase molybdopterin binding protein1e-0757.4
NC_013922:3696697:371042337104233711121699Natrialba magadii ATCC 43099 chromosome, complete genomeoxidoreductase molybdopterin binding protein3e-0756.2
NC_014217:3431878:3431878343187834330951218Starkeya novella DSM 506 chromosome, complete genomeoxidoreductase molybdopterin binding protein3e-0755.8
NC_009720:2945655:2961561296156129627781218Xanthobacter autotrophicus Py2, complete genomeoxidoreductase molybdopterin binding1e-0654.3
NC_009720:251703:2607632607632619801218Xanthobacter autotrophicus Py2, complete genomeoxidoreductase molybdopterin binding1e-0654.3
NC_016935:789849:796860796860797453594Paenibacillus mucilaginosus 3016 chromosome, complete genomehypothetical protein1e-0654.3
NC_012988:731790:7317907317907329951206Methylobacterium extorquens DM4, complete genomesulfite:cytochrome C oxidoreductase subunit A1e-0654.3
NC_015690:790500:797334797334797927594Paenibacillus mucilaginosus KNP414 chromosome, complete genomeYuiH1e-0654.3
NC_011758:369704:1867186730781212Methylobacterium chloromethanicum CM4 plasmid pMCHL01, completeoxidoreductase molybdopterin binding1e-0653.9
NC_009142:1282589:1285306128530612864091104Saccharopolyspora erythraea NRRL 2338, complete genomenitrate reductase (NADH)2e-0653.1
NC_010505:5583000:5585943558594355871661224Methylobacterium radiotolerans JCM 2831, complete genomeoxidoreductase molybdopterin binding3e-0653.1
NC_015594:1210736:1228268122826812294731206Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeSulfite oxidase3e-0652.8
NC_008701:1226797:124094112409411241408468Pyrobaculum islandicum DSM 4184, complete genomeoxidoreductase, molybdopterin binding5e-0652
NC_012491:4987280:500633550063355006931597Brevibacillus brevis NBRC 100599, complete genomehypothetical protein7e-0651.6