Pre_GI Gene

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Host: NC_007952 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007952:1416000 Burkholderia xenovorans LB400 chromosome 2, complete sequence

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
14160741416742669hypothetical protein
141672014182491530hypothetical proteinBLASTP
141834314197431401ornithine cyclodeaminaseMu-crystallin family proteinQuickGO ontologyBLASTP
141998314214701488Glucose-6-phosphate dehydrogenaseQuickGO ontologyBLASTP
14224671423063597Conserved hypothetical protein 52QuickGO ontologyBLASTP
142308014242851206Putative major facilitator superfamily MFStransporterQuickGO ontologyBLASTP
14243051424997693HAD-superfamily hydrolase subfamily IA variant3QuickGO ontologyBLASTP
142596614270841119Aldose 1-epimeraseQuickGO ontologyBLASTP
14272591427654396hypothetical protein
14276321427886255hypothetical protein
14279761428932957Transcriptional regulator LysR familyQuickGO ontologyBLASTP
142964914307011053Zinc-containing alcohol dehydrogenase superfamilyQuickGO ontologyBLASTP
14310201431988969Transcriptional regulator AraC familyQuickGO ontologyBLASTP
14320071432783777oxidoreductase molybdopterin-binding proteinQuickGO ontologyBLASTP
14327801433412633hypothetical proteinBLASTP
14335051434137633hypothetical proteinBLASTP
14343411435012672hypothetical proteinBLASTP
143500914364091401Heavy metal sensor signal transduction histidine kinases STHKQuickGO ontologyBLASTP
14364401436781342PhnA proteinQuickGO ontologyBLASTP
14370511437353303hypothetical proteinBLASTP
143738114388681488Putative diguanylate cyclase GGDEF domainQuickGO ontologyBLASTP