Pre_GI Gene

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Host: NC_012483 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012483:3529895 Acidobacterium capsulatum ATCC 51196, complete genome

Host Lineage: Acidobacterium capsulatum; Acidobacterium; Acidobacteriaceae; Acidobacteriales; Acidobacteria; Bacteria

General Information: Isolated from acidic mine drainage in Yanahara mine, Okayama, Japan. Acidophilic bacterium. This genus comprises a number of species commonly found in water reservoirs, microbial mats, many different soil types, marine and freshwater sediments, as well as in hot-spring mats and sediments, etc. Furthermore, they sometimes form the dominant group in a habitat. These bacteria are involved in the first step of destruction of biologically complex molecules produced by autotrophic (capable of synthesizing their own nutrients) microorganisms. Acidobacterium capsulatum is an aerobic, mesophilic, chemo-organotroph able to use a variety of carbon sources and to grow up to pH 6.0. The species comprises several strains characterized by orange pigmentation, production of menoquinones as their sole quinones, and branched-chain iso fatty acids as their cell envelope components.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
35298953530863969oxidoreductase molybdopterin-bindingQuickGO ontologyBLASTP
35309043531524621hypothetical proteinBLASTP
35334283533544117hypothetical protein
353366835348101143nickel-dependent hydrogenase small subunitQuickGO ontologyBLASTP
353481035365461737nickel-dependent hydrogenase large subunitQuickGO ontologyBLASTP
35365503537344795nickel-iron hydrogenase b-type cytochrome subunitQuickGO ontologyBLASTP
35373313537843513hydrogenase maturation proteaseQuickGO ontologyBLASTP
35378483538195348putative hydrogenase nickel insertion protein HypAQuickGO ontologyBLASTP
35381923538872681hydrogenase accessory protein HypBQuickGO ontologyBLASTP
353892535400491125hydrogenase expressionformation protein HypEQuickGO ontologyBLASTP
354004635411731128hydrogenase expressionformation protein HypDQuickGO ontologyBLASTP
35411703541436267hydrogenase assembly chaperone HypCHupFQuickGO ontologyBLASTP
354144235437872346NiFe hydrogenase maturation protein HypFQuickGO ontologyBLASTP
3543845354394399hypothetical protein
354400535453091305transporter small conductance mechanosensitive ion channel familyQuickGO ontologyBLASTP
354540835466791272transporter major facilitator familyQuickGO ontologyBLASTP
354679035481091320transporter major facilitator familyQuickGO ontologyBLASTP
35481863548890705hypothetical protein
354942135504671047hypothetical protein
355057735534202844phosphoenolpyruvate carboxykinase GTPQuickGO ontologyBLASTP