Pre_GI: BLASTP Hits

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Query: NC_004088:4202247:4220975 Yersinia pestis KIM, complete genome

Start: 4220975, End: 4221565, Length: 591

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:4065625:408435340843534084943591Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,phosphatase2e-113407
NC_008800:36500:406484064841235588Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,phosphatase1e-101368
NC_010067:3538169:356629935662993566898600Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein7e-78289
NC_011080:4177443:419707741970774197676600Salmonella enterica subsp. enterica serovar Newport str. SL254,phosphatase YihX8e-78289
NC_013892:202778:224222224222224881660Xenorhabdus bovienii SS-2004 chromosome, complete genomephosphatase-like domain-containing protein2e-77288
NC_013282:4312791:433241243324124333011600Cronobacter turicensis, complete genomePhosphatase yihX5e-75280
NC_019904:3127945:313029731302973130929633Echinicola vietnamensis DSM 17526 chromosome, complete genomehaloacid dehalogenase superfamily protein2e-1995.5
NC_013132:782846:786635786635787249615Chitinophaga pinensis DSM 2588, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 32e-1891.7
NC_016609:7565483:758021775802177580828612Niastella koreensis GR20-10 chromosome, complete genomeHAD-superfamily hydrolase2e-1685.5
NC_016633:1130705:114763311476331148517885Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomehaloacid dehalogenase superfamily protein1e-1479.3
NC_015152:1230995:125413912541391254792654Spirochaeta sp. Buddy chromosome, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 38e-1373.6
NC_015436:202384:202384202384203016633Spirochaeta coccoides DSM 17374 chromosome, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 33e-1271.6
NC_013410:2691437:271165027116502712309660Fibrobacter succinogenes subsp. succinogenes S85 chromosome,HAD-superfamily hydrolase4e-1271.2
NC_005363:2172444:218416721841672184772606Bdellovibrio bacteriovorus HD100, complete genomeputative haloacid dehalogenase-like hydrolase1e-1066.6
NC_013131:7945280:795421779542177954840624Catenulispora acidiphila DSM 44928, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 31e-0963.2
NC_003030:3763054:378020237802023780807606Clostridium acetobutylicum ATCC 824, complete genomeHAD superfamily hydrolase1e-0756.6
NC_015687:3766000:378178537817853782390606Clostridium acetobutylicum DSM 1731 chromosome, complete genomeHAD family phosphatase1e-0756.6
NC_017295:3762622:377955437795543780159606Clostridium acetobutylicum EA 2018 chromosome, complete genomeHAD superfamily hydrolase1e-0756.6
NC_010644:485966:499364499364499972609Elusimicrobium minutum Pei191, complete genomeHAD family hydrolase9e-0856.6
NC_014638:1139824:114151811415181142147630Bifidobacterium bifidum PRL2010 chromosome, complete genomehaloacid dehalogenase9e-0856.6
NC_000853:648075:674278674278674883606Thermotoga maritima MSB8, complete genomehypothetical protein1e-0756.2
NC_015576:3976679:400094240009424001580639Mycobacterium sp. JDM601 chromosome, complete genomeHAD family hydrolase5e-0754.3
NC_014933:901897:911981911981912610630Bacteroides helcogenes P 36-108 chromosome, complete genomeHAD-superfamily hydrolase, subfamily IA, variant 38e-0753.5
NC_008769:3769065:377772037777203778373654Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomehypothetical protein2e-0652.4
NC_012207:3766978:377563337756333776286654Mycobacterium bovis BCG str. Tokyo 172, complete genomehypothetical protein2e-0652.4
NC_009565:3793976:380263138026313803284654Mycobacterium tuberculosis F11, complete genomehypothetical protein2e-0652.4
NC_002945:3735141:374379637437963744449654Mycobacterium bovis AF2122/97, complete genomehypothetical protein2e-0652.4
NC_016109:3875617:387905938790593879682624Kitasatospora setae KM-6054, complete genomeputative hydrolase2e-0652.4
NC_002755:3773734:378238937823893783042654Mycobacterium tuberculosis CDC1551, complete genomehydrolase, haloacid dehalogenase-like family2e-0652.4
NC_000962:3781501:379015637901563790809654Mycobacterium tuberculosis H37Rv, complete genomehypothetical protein2e-0652.4
NC_009525:3794000:379927937992793799932654Mycobacterium tuberculosis H37Ra, complete genomehypothetical protein2e-0652.4
NC_012943:3777371:378602637860263786679654Mycobacterium tuberculosis KZN 1435 chromosome, complete genomehypothetical protein2e-0652.4
NC_016768:3774105:378276037827603783413654Mycobacterium tuberculosis KZN 4207 chromosome, complete genomehypothetical protein2e-0652.4
NC_016804:3753243:375708537570853757738654Mycobacterium bovis BCG str. Mexico chromosome, complete genomehypothetical protein2e-0652.4
NC_017026:3754000:375940837594083760061654Mycobacterium tuberculosis RGTB327 chromosome, complete genomeputative HAD superfamily hydrolase2e-0652.4
NC_015848:3851230:385988438598843860537654Mycobacterium canettii CIPT 140010059, complete genomehypothetical protein6e-0650.8
NC_019950:3818000:382327538232753823928654Mycobacterium canettii CIPT 140060008 complete genomehypothetical protein6e-0650.8