Pre_GI: BLASTP Hits

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Query: NC_002505:1550108:1571738 Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete

Start: 1571738, End: 1572817, Length: 1080

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is an epidemic serogroup of Vibrio cholerae isolated in 1971 in Bangladesh and is distinguished from the classical biotype due to hemolysin production. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016944:1547176:1568764156876415698431080Vibrio cholerae IEC224 chromosome I, complete sequenceRstA1 protein0748
NC_002505:1550108:1564822156482215659011080Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completeRstA1 protein0748
NC_009456:557962:5616515616515627301080Vibrio cholerae O395 chromosome 1, complete sequenceRstA1 protein0748
NC_012583:683887:7012127012127022911080Vibrio cholerae O395 chromosome chromosome II, complete sequenceRstA2 protein0748
NC_012667:839318:8570048570048580831080Vibrio cholerae MJ-1236 chromosome 2, complete genomeRstA phage-related replication protein0748
NC_016445:1027143:1046013104601310470921080Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeRstA1 protein0748
NC_016445:1027143:1048738104873810498171080Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeRstA1 protein0748
NC_016944:1547176:1561851156185115629301080Vibrio cholerae IEC224 chromosome I, complete sequenceRstA1 protein0748
NC_014966:919442:9198269198269208931068Vibrio vulnificus MO6-24/O chromosome II, complete sequenceRstA family transcripitonal regulator3e-68259
NC_005140:883857:8953428953428966371296Vibrio vulnificus YJ016 chromosome II, complete sequencevpf402 homologue2e-53210
NC_005140:883857:8909818909818922761296Vibrio vulnificus YJ016 chromosome II, complete sequencevpf402 homologue2e-53210
NC_009783:2306953:2306953230695323080981146Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein1e-53210
NC_013457:140474:1601441601441612921149Vibrio sp. Ex25 chromosome 2, complete genomeRstA phage-related replication protein2e-50199
NC_016745:2229271:2243852224385222450811230Oceanimonas sp. GK1 chromosome, complete genomeputative phage replication initiation factor4e-1789.4
NC_003112:1594000:1600909160090916021231215Neisseria meningitidis MC58, complete genomehypothetical protein9e-1478.2
NC_005966:1832066:1849100184910018502631164Acinetobacter sp. ADP1, complete genomeputative phage replication initiation factor1e-1377.8
NC_005966:1832066:1856146185614618573091164Acinetobacter sp. ADP1, complete genomeputative phage replication initiation factor1e-1377.8
NC_010120:144000:1568181568181580321215Neisseria meningitidis 053442, complete genomeconserved hypothetical protein2e-1377.4
NC_017505:1516348:1527645152764515288591215Neisseria meningitidis alpha710 chromosome, complete genomehypothetical protein2e-1377.4
NC_017518:1610803:1617108161710816183221215Neisseria meningitidis NZ-05/33 chromosome, complete genomereplication initiation factor2e-1377.4
NC_017518:1701958:1712494171249417137081215Neisseria meningitidis NZ-05/33 chromosome, complete genomereplication initiation factor2e-1377.4
NC_003116:1734000:1737566173756617388341269Neisseria meningitidis Z2491, complete genomehypothetical protein1e-1377.4
NC_017518:1558000:1568272156827215695401269Neisseria meningitidis NZ-05/33 chromosome, complete genomereplication initiation factor1e-1377.4
NC_017512:526892:5391425391425404911350Neisseria meningitidis WUE 2594, complete genomeputative phage replication initiation factor7e-1375.1
NC_003116:755666:7679157679157692641350Neisseria meningitidis Z2491, complete genomephage replication protein7e-1375.1
NC_014752:1391615:1412796141279614141451350Neisseria lactamica ST-640, complete genomehypothetical protein1e-1274.7
NC_003112:1685330:1697126169712616983341209Neisseria meningitidis MC58, complete genomehypothetical protein2e-1273.6
NC_008767:1888950:1893555189355518947631209Neisseria meningitidis FAM18, complete genomeputative replication initiation factor2e-1273.6
NC_008767:273759:2804072804072816151209Neisseria meningitidis FAM18, complete genomehypothetical protein2e-1273.6
NC_017505:926801:9338419338419350491209Neisseria meningitidis alpha710 chromosome, complete genomephage replication protein2e-1273.6
NC_017515:800000:8121878121878133951209Neisseria meningitidis M04-240196 chromosome, complete genomereplication initiation factor2e-1273.6
NC_008767:1739344:1743688174368817448961209Neisseria meningitidis FAM18, complete genomehypothetical protein2e-1273.6
NC_010682:1482365:1482848148284814839451098Ralstonia pickettii 12J chromosome 1, complete sequencereplication initiation factor7e-1168.6
NC_008782:752686:7631807631807642741095Acidovorax sp. JS42, complete genomereplication initiation factor8e-1168.2
NC_017516:1755500:1795728179572817967621035Neisseria meningitidis H44/76 chromosome, complete genomereplication initiation factor1e-1067.8
NC_017515:1744500:1793203179320317942371035Neisseria meningitidis M04-240196 chromosome, complete genomereplication initiation factor1e-1067.8
NC_017518:1843705:1845004184500418460051002Neisseria meningitidis NZ-05/33 chromosome, complete genomereplication initiation factor2e-1067.4
NC_017505:497603:5059575059575073121356Neisseria meningitidis alpha710 chromosome, complete genomeputative phage replication initiation protein2e-1067
NC_017501:517758:521067521067521774708Neisseria meningitidis 8013, complete genome1e-0861.2
NC_013722:1785692:1794739179473917958181080Xanthomonas albilineans, complete genomehypothetical phage-related protein.3e-0860.1
NC_006834:2377335:2383499238349923845721074Xanthomonas oryzae pv. oryzae KACC10331, complete genomePutative phage replication protein RstA7e-0858.5
NC_007705:2357000:2363068236306823641411074Xanthomonas oryzae pv. oryzae MAFF 311018, complete genomehypothetical protein7e-0858.5
NC_010717:2360000:236622123662212367135915Xanthomonas oryzae pv. oryzae PXO99A, complete genomephage replication protein8e-0858.2
NC_009074:2914053:2921676292167629227911116Burkholderia pseudomallei 668 chromosome I, complete sequencephage replication protein2e-0757