Pre_GI Gene

Some Help

Host: NC_010717 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010717:2360000 Xanthomonas oryzae pv. oryzae PXO99A, complete genome

Host Lineage: Xanthomonas oryzae; Xanthomonas; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: This strain is a representative strain of race 6 isolated in the Philippines. This plant pathogen affects rice plants by causing leaf blight, a major problem in Asian countries where rice production occurs on an industrial scale. This organism enters the xylem and spreads throughout the vascular tissue of the plant, which results in wilting of the plant, or to leaf blight if the infection occurs later in development. This genus consists of plant-specific yellow-pigmented microbes, some of which are economically important phytopathogens that devastate crops such as citrus plants, rice, beans, grape, and cotton. These organisms are almost exclusively found associated with their plant hosts and are not found free in the soil. Xanthomonas oryzae contains two pathovars which cause enconomically significant diseases in rice. Xanthomonas oryzae pathovar oryzae causes bacterial leaf blight which is one of the most serious diseases of rice. This disease is common in temperate and tropical areas and can cause significant crop loss.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
236000823624402433TAL effector AvrBs3PthAQuickGO ontologyBLASTP
23624412362563123nitroreductaseQuickGO ontology
23625352362690156hypothetical proteinBLASTP
23638652364518654pectate lyase LQuickGO ontologyBLASTP
23657232365926204hypothetical proteinBLASTP
23662212367135915phage replication proteinQuickGO ontologyBLASTP
23672402367539300helix-destabilizing proteinQuickGO ontologyBLASTP
23675432367662120hypothetical protein
23679032368142240hypothetical proteinBLASTP
23689182369733816hypothetical proteinBLASTP
237005223712361185hypothetical proteinBLASTP
23733102373492183hypothetical proteinBLASTP
23739592374306348ISXoo11 transposaseQuickGO ontologyBLASTP
23743032374722420ISXoo12 transposaseQuickGO ontologyBLASTP
23749882375713726hypothetical protein
237567623775681893hypothetical proteinBLASTP
23776962378598903hypothetical proteinBLASTP
23797142379845132hypothetical protein
23802532380465213transposaseQuickGO ontologyBLASTP
23806592381303645transposaseQuickGO ontologyBLASTP
23813032381596294transposaseQuickGO ontologyBLASTP
23824382383430993ISXo8QuickGO ontologyBLASTP
23841092384249141hypothetical proteinBLASTP
238428423871932910TAL effector AvrBs3PthAQuickGO ontologyBLASTP