Pre_GI: BLASTN Hits

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Query: NC_021182:2965395 Clostridium pasteurianum BC1, complete genome

Start: 2965395, End: 2988500, Length: 23106

Host Lineage: Clostridium pasteurianum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Environment: Soil; Isolation: Coal-cleaning residues; Temp: Mesophile; Temp: 30C. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium pasteurianum was first isolated from soil by the Russian microbiologist Sergey Winogradsky. This organism is able to fix nitrogen and oxidize hydrogen into protons. The genes involved in nitrogen fixation and hydrogen oxidation have been extensively studied in this organism.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_021182:43435143435145489320543Clostridium pasteurianum BC1, complete genome7e-158565BLASTN svgBLASTP svg
NC_008262:22424322242432226666224231Clostridium perfringens SM101, complete genome3e-86327BLASTN svgBLASTP svg
NC_003366:23561482356148238179725650Clostridium perfringens str. 13, complete genome4e-79303BLASTN svgBLASTP svg
NC_008593:15131071513107153682423718Clostridium novyi NT, complete genome4e-73283BLASTN svgBLASTP svg
NC_021182:380500*38050040092720428Clostridium pasteurianum BC1, complete genome6e-66260BLASTN svgBLASTP svg
NC_021182:40228944022894404142618533Clostridium pasteurianum BC1, complete genome6e-66260BLASTN svgBLASTP svg
NC_021182:16549031654903167678221880Clostridium pasteurianum BC1, complete genome6e-63250BLASTN svgBLASTP svg
NC_021182:40112940112942526224134Clostridium pasteurianum BC1, complete genome9e-62246BLASTN svgBLASTP svg
NC_021182:30041530041531873118317Clostridium pasteurianum BC1, complete genome3e-61244BLASTN svgBLASTP svg
NC_021182:2883716*2883716290856724852Clostridium pasteurianum BC1, complete genome2e-59238BLASTN svgBLASTP svg
NC_021182:3525523*3525523356673741215Clostridium pasteurianum BC1, complete genome8e-59236BLASTN svgBLASTP svg
NC_021182:14735351473535149659923065Clostridium pasteurianum BC1, complete genome1e-54222BLASTN svgBLASTP svg
NC_021182:29210002921000295537334374Clostridium pasteurianum BC1, complete genome1e-54222BLASTN svgBLASTP svg
NC_021182:11880001188000121083922840Clostridium pasteurianum BC1, complete genome5e-48200BLASTN svgBLASTP svg
NC_021182:34386013438601346026021660Clostridium pasteurianum BC1, complete genome7e-41176BLASTN svgBLASTP svg
NC_021182:10777211077721109639718677Clostridium pasteurianum BC1, complete genome3e-40174BLASTN svgBLASTP svg
NC_008262:2348328*2348328236708418757Clostridium perfringens SM101, complete genome1e-36163BLASTN svgBLASTP svg
NC_021182:93000*9300014465551656Clostridium pasteurianum BC1, complete genome4e-36161BLASTN svgBLASTP svg
NC_021182:3409199*3409199343177822580Clostridium pasteurianum BC1, complete genome1e-33153BLASTN svgBLASTP svg
NC_020291:64267046426704645309926396Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome2e-32149BLASTN svgBLASTP svg
NC_021182:2667408*2667408269011022703Clostridium pasteurianum BC1, complete genome9e-31143BLASTN svgBLASTP svg
NC_015275:566000*56600059144025441Clostridium lentocellum DSM 5427 chromosome, complete genome4e-30141BLASTN svgBLASTP svg
NC_021182:4602683*4602683462770125019Clostridium pasteurianum BC1, complete genome1e-29139BLASTN svgBLASTP svg
NC_021182:10095261009526103309923574Clostridium pasteurianum BC1, complete genome6e-29137BLASTN svgBLASTP svg
NC_021182:19834561983456200518921734Clostridium pasteurianum BC1, complete genome9e-25123BLASTN svgBLASTP svg
NC_021182:17617891761789178207920291Clostridium pasteurianum BC1, complete genome9e-25123BLASTN svgBLASTP svg
NC_021182:35768153576815360061123797Clostridium pasteurianum BC1, complete genome1e-23119BLASTN svgBLASTP svg
NC_021182:4427468*4427468445021222745Clostridium pasteurianum BC1, complete genome2e-22115BLASTN svgBLASTP svg
NC_014328:3682000*3682000370562423625Clostridium ljungdahlii ATCC 49587 chromosome, complete genome1e-20109BLASTN svgBLASTP svg
NC_015518:1052701*1052701107851725817Acidianus hospitalis W1 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_013156:573037*57303759668923653Methanocaldococcus fervens AG86, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_008277:428926*42892646331934394Borrelia afzelii PKo, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_008262:2649289*2649289270467655388Clostridium perfringens SM101, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_021182:2360500*2360500238564325144Clostridium pasteurianum BC1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013741:56538956538958988224494Archaeoglobus profundus DSM 5631, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_006156:685344*68534470851723174Borrelia garinii PBi chromosome linear, complete sequence4e-0867.9BLASTN svgBLASTP svg
NC_009089:96595996595998833722379Clostridium difficile 630, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_021182:2059143*2059143208239023248Clostridium pasteurianum BC1, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_019949:601691*60169162049118801Mycoplasma cynos C142 complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015949:633663363009923764Caldicellulosiruptor lactoaceticus 6A chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015921:425225*42522545330328079Borrelia bissettii DN127 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009922:1*12276322763Alkaliphilus oremlandii OhILAs, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014328:28727212872721289675024030Clostridium ljungdahlii ATCC 49587 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_013316:89178289178291434722566Clostridium difficile R20291, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014328:1*11850018500Clostridium ljungdahlii ATCC 49587 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_000909:597692*59769262002322332Methanocaldococcus jannaschii DSM 2661, complete genome3e-0661.9BLASTN svgBLASTP svg