Pre_GI: BLASTN Hits

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Query: NC_015733:5909821 Pseudomonas putida S16 chromosome, complete genome

Start: 5909821, End: 5955137, Length: 45317

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010501:26095672609567264709937533Pseudomonas putida W619, complete genome09145BLASTN svgBLASTP svg
NC_015740:12917391291739131529623558Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete09137BLASTN svgBLASTP svg
NC_008463:12930791293079133019337115Pseudomonas aeruginosa UCBPP-PA14, complete genome08970BLASTN svgBLASTP svg
NC_010501:30000300007042840429Pseudomonas putida W619, complete genome03983BLASTN svgBLASTP svg
NC_009512:27783277836731639534Pseudomonas putida F1, complete genome03983BLASTN svgBLASTP svg
NC_002947:8394*83945373745344Pseudomonas putida KT2440, complete genome03983BLASTN svgBLASTP svg
NC_008573:19531719531724745052134Shewanella sp. ANA-3 plasmid 1, complete sequence02660BLASTN svgBLASTP svg
NC_010410:36068263606826369540988584Acinetobacter baumannii AYE, complete genome02660BLASTN svgBLASTP svg
NC_003384:10903610903613209923064Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid02652BLASTN svgBLASTP svg
NC_004757:90541790541793018024764Nitrosomonas europaea ATCC 19718, complete genome02123BLASTN svgBLASTP svg
NC_008344:1364142*1364142138709922958Nitrosomonas eutropha C91, complete genome02072BLASTN svgBLASTP svg
NC_008341:29038290385221923182Nitrosomonas eutropha C91 plasmid1, complete sequence02072BLASTN svgBLASTP svg
NC_009140:121107*12110714459223486Salmonella enterica enterica sv Newport str. SL254, complete01792BLASTN svgBLASTP svg
NC_009512:59209605920960595518534226Pseudomonas putida F1, complete genome01699BLASTN svgBLASTP svg
NC_008344:1*13873538735Nitrosomonas eutropha C91, complete genome01590BLASTN svgBLASTP svg
NC_011992:22797522279752232691047159Acidovorax ebreus TPSY, complete genome01526BLASTN svgBLASTP svg
NC_009349:78000*7800010171623717Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, complete01394BLASTN svgBLASTP svg
NC_003384:15715815715818443827281Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid01394BLASTN svgBLASTP svg
NC_008027:58427405842740587100528266Pseudomonas entomophila L48, complete genome01314BLASTN svgBLASTP svg
NC_015422:3513689*3513689356513551447Alicycliphilus denitrificans K601 chromosome, complete genome01265BLASTN svgBLASTP svg
NC_002947:61236086123608614375120144Pseudomonas putida KT2440, complete genome01225BLASTN svgBLASTP svg
NC_005773:4028500*4028500405209923600Pseudomonas syringae pv. phaseolicola 1448A, complete genome01057BLASTN svgBLASTP svg
NC_011662:2402408*2402408242621923812Thauera sp. MZ1T, complete genome0884BLASTN svgBLASTP svg
NC_014366:58834758834761001621670Gamma proteobacterium HdN1, complete genome0759BLASTN svgBLASTP svg
NC_011667:1*11990019900Thauera sp. MZ1T plasmid pTha01, complete sequence0708BLASTN svgBLASTP svg
NC_013960:16936431693643171517421532Nitrosococcus halophilus Nc4 chromosome, complete genome5e-179636BLASTN svgBLASTP svg
NC_010943:24228382422838245809935262Stenotrophomonas maltophilia K279a, complete genome4e-133484BLASTN svgBLASTP svg
NC_007274:72979729799468121703Pseudomonas syringae pv. phaseolicola 1448A large plasmid, complete3e-118434BLASTN svgBLASTP svg
NC_008345:41078474107847413795830112Shewanella frigidimarina NCIMB 400, complete genome3e-115424BLASTN svgBLASTP svg
NC_007973:32408663240866326591125046Ralstonia metallidurans CH34 chromosome 1, complete sequence7e-101377BLASTN svgBLASTP svg
NC_008609:1976403*1976403207096194559Pelobacter propionicus DSM 2379, complete genome7e-101377BLASTN svgBLASTP svg
NC_008740:14149261414926144139326468Marinobacter aquaeolei VT8, complete genome7e-101377BLASTN svgBLASTP svg
NC_010002:29339092933909297250438596Delftia acidovorans SPH-1, complete genome2e-98369BLASTN svgBLASTP svg
NC_009439:12978511297851133481436964Pseudomonas mendocina ymp, complete genome4e-93351BLASTN svgBLASTP svg
NC_014107:17117017117019899927830Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_A,2e-70276BLASTN svgBLASTP svg
NC_010801:42190642190645748035575Burkholderia multivorans ATCC 17616 chromosome 3, complete7e-61244BLASTN svgBLASTP svg
NC_002947:21576482157648219238834741Pseudomonas putida KT2440, complete genome3e-60242BLASTN svgBLASTP svg
NC_015138:41034574103457412794224486Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete4e-53218BLASTN svgBLASTP svg
NC_009434:3611738*36117383748875137138Pseudomonas stutzeri A1501, complete genome1e-49206BLASTN svgBLASTP svg
NC_004349:393839382609922162Shewanella oneidensis MR-1 plasmid pMR-1, complete sequence2e-48202BLASTN svgBLASTP svg
NC_010804:996837996837104668249846Burkholderia multivorans ATCC 17616 chromosome 1, complete1e-46196BLASTN svgBLASTP svg
NC_007509:366836686033156664Burkholderia sp. 383 chromosome 3, complete sequence9e-45190BLASTN svgBLASTP svg
NC_014910:2779573*2779573280354723975Alicycliphilus denitrificans BC chromosome, complete genome1e-43186BLASTN svgBLASTP svg
NC_010087:376918*37691844748870571Burkholderia multivorans ATCC 17616 chromosome 3, complete3e-41178BLASTN svgBLASTP svg
NC_010801:50500050500052310518106Burkholderia multivorans ATCC 17616 chromosome 3, complete3e-41178BLASTN svgBLASTP svg
NC_009439:2427120*2427120248116354044Pseudomonas mendocina ymp, complete genome5e-40174BLASTN svgBLASTP svg
NC_010515:11242981124298115292928632Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence1e-37167BLASTN svgBLASTP svg
NC_011751:49925004992500501338720888Escherichia coli UMN026 chromosome, complete genome2e-36163BLASTN svgBLASTP svg
NC_010611:24083924083927225731419Acinetobacter baumannii ACICU, complete genome2e-36163BLASTN svgBLASTP svg
NC_006856:26438*264384625619819Salmonella enterica subsp. enterica serovar Choleraesuis str3e-35159BLASTN svgBLASTP svg
NC_008786:15538331553833157650522673Verminephrobacter eiseniae EF01-2, complete genome7e-33151BLASTN svgBLASTP svg
NC_008712:21549921549924259227094Arthrobacter aurescens TC1 plasmid TC1, complete sequence3e-32149BLASTN svgBLASTP svg
NC_009138:1974935*1974935203606461130Herminiimonas arsenicoxydans, complete genome2e-30143BLASTN svgBLASTP svg
NC_011071:22073852207385223164424260Stenotrophomonas maltophilia R551-3, complete genome3e-29139BLASTN svgBLASTP svg
NC_008463:52469545246954530671059757Pseudomonas aeruginosa UCBPP-PA14, complete genome2e-27133BLASTN svgBLASTP svg
NC_008687:30245030245032509922650Paracoccus denitrificans PD1222 chromosome 2, complete sequence7e-27131BLASTN svgBLASTP svg
NC_007404:13880491388049141186723819Thiobacillus denitrificans ATCC 25259, complete genome3e-26129BLASTN svgBLASTP svg
NC_014910:24284524284528559942755Alicycliphilus denitrificans BC chromosome, complete genome4e-25125BLASTN svgBLASTP svg
NC_008782:13080071308007132716219156Acidovorax sp. JS42, complete genome2e-24123BLASTN svgBLASTP svg
NC_009138:15839881583988160724223255Herminiimonas arsenicoxydans, complete genome4e-22115BLASTN svgBLASTP svg
NC_015145:923979239712169429298Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genome4e-22115BLASTN svgBLASTP svg
NC_015733:3736104*37361043837697101594Pseudomonas putida S16 chromosome, complete genome3e-20109BLASTN svgBLASTP svg
NC_004578:63347356334735636397929245Pseudomonas syringae pv. tomato str. DC3000, complete genome3e-20109BLASTN svgBLASTP svg
NC_015733:21946762194676221628521610Pseudomonas putida S16 chromosome, complete genome1e-19107BLASTN svgBLASTP svg
NC_014323:50510415051041507664325603Herbaspirillum seropedicae SmR1 chromosome, complete genome1e-19107BLASTN svgBLASTP svg
NC_010002:1879220*1879220196064881429Delftia acidovorans SPH-1, complete genome1e-19107BLASTN svgBLASTP svg
NC_007952:30375903037590305617618587Burkholderia xenovorans LB400 chromosome 2, complete sequence4e-19105BLASTN svgBLASTP svg
NC_008027:3953951*3953951397851024560Pseudomonas entomophila L48, complete genome2e-18103BLASTN svgBLASTP svg
NC_008752:27249772724977274618021204Acidovorax avenae subsp. citrulli AAC00-1, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_011138:3182807*3182807321165528849Alteromonas macleodii 'Deep ecotype', complete genome1e-1697.6BLASTN svgBLASTP svg
NC_009720:32103873210387322809917713Xanthobacter autotrophicus Py2, complete genome1e-1697.6BLASTN svgBLASTP svg
NC_008740:25743425743428330125868Marinobacter aquaeolei VT8, complete genome1e-1697.6BLASTN svgBLASTP svg
NC_007777:26385802638580267126232683Frankia sp. CcI3, complete genome1e-1697.6BLASTN svgBLASTP svg
NC_004129:2328491*2328491236123032740Pseudomonas fluorescens Pf-5, complete genome1e-1697.6BLASTN svgBLASTP svg
NC_004578:60899586089958612236632409Pseudomonas syringae pv. tomato str. DC3000, complete genome2e-1593.7BLASTN svgBLASTP svg
NC_009668:445134*44513451474969616Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequence6e-1591.7BLASTN svgBLASTP svg
NC_008782:19176341917634194559927966Acidovorax sp. JS42, complete genome6e-1591.7BLASTN svgBLASTP svg
NC_006363:36959369596117324215Nocardia farcinica IFM 10152 plasmid pNF2, complete sequence6e-1591.7BLASTN svgBLASTP svg
NC_011886:17703917703920120524167Arthrobacter chlorophenolicus A6, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_009720:43675844367584439276525182Xanthobacter autotrophicus Py2, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_003296:61200061200063500323004Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete2e-1489.7BLASTN svgBLASTP svg
NC_014836:33278332785876525488Desulfurispirillum indicum S5 chromosome, complete genome9e-1487.7BLASTN svgBLASTP svg
NC_011894:57879905787990583359945610Methylobacterium nodulans ORS 2060, complete genome4e-1385.7BLASTN svgBLASTP svg
NC_013446:28200002820000286592045921Comamonas testosteroni CNB-2, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_002488:18126961812696186320850513Xylella fastidiosa 9a5c, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_010943:929492943752228229Stenotrophomonas maltophilia K279a, complete genome6e-1281.8BLASTN svgBLASTP svg
NC_009832:37032023703202372686423663Serratia proteamaculans 568, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_009720:87019487019489166821475Xanthobacter autotrophicus Py2, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_007484:16718351671835169794126107Nitrosococcus oceani ATCC 19707, complete genome9e-1177.8BLASTN svgBLASTP svg
NC_007484:16947381694738171826123524Nitrosococcus oceani ATCC 19707, complete genome9e-1177.8BLASTN svgBLASTP svg
NC_015663:2090442*2090442212127330832Enterobacter aerogenes KCTC 2190 chromosome, complete genome4e-1075.8BLASTN svgBLASTP svg
NC_015733:443122*44312246159918478Pseudomonas putida S16 chromosome, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_008825:2525380*2525380255303327654Methylibium petroleiphilum PM1, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_008027:55333115533311555523921929Pseudomonas entomophila L48, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_008027:2051821*2051821207333821518Pseudomonas entomophila L48, complete genome6e-0971.9BLASTN svgBLASTP svg
NC_002947:4484824*4484824451609931276Pseudomonas putida KT2440, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_003888:7561923*7561923764778785865Streptomyces coelicolor A3(2), complete genome2e-0869.9BLASTN svgBLASTP svg
NC_004578:5336773*5336773541660879836Pseudomonas syringae pv. tomato str. DC3000, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_008782:15100001510000154094730948Acidovorax sp. JS42, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_015576:14427131442713147609933387Mycobacterium sp. JDM601 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_015740:2692023*2692023271734525323Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete2e-0869.9BLASTN svgBLASTP svg
NC_020388:48680348680351020323401Natronomonas moolapensis 8.8.11 complete genome2e-0869.9BLASTN svgBLASTP svg
NC_004556:10760631076063110003523973Xylella fastidiosa Temecula1, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_008027:1559083*1559083158236923287Pseudomonas entomophila L48, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_011206:20400002040000206689226893Acidithiobacillus ferrooxidans ATCC 53993, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_011770:28042182804218282883824621Pseudomonas aeruginosa LESB58, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_011992:1179084*1179084120383024747Acidovorax ebreus TPSY, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_015422:28582282858228292680368576Alicycliphilus denitrificans K601 chromosome, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_009720:44069914406991444791640926Xanthobacter autotrophicus Py2, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_009720:67085367085369197421122Xanthobacter autotrophicus Py2, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_010170:4800000*48000004908823108824Bordetella petrii, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_012811:139498*13949816287223375Methylobacterium extorquens AM1 megaplasmid, complete sequence3e-0765.9BLASTN svgBLASTP svg
NC_015942:78780878780881145823651Acidithiobacillus ferrivorans SS3 chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_010681:22141622141624493823523Burkholderia phytofirmans PsJN chromosome 1, complete sequence1e-0663.9BLASTN svgBLASTP svg
NC_010617:55493554937369118199Kocuria rhizophila DC2201, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_014315:17444851744485177156527081Nitrosococcus watsoni C-113 chromosome, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_013174:373726*37372639441720692Jonesia denitrificans DSM 20603, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_011757:11212621121262114088219621Methylobacterium chloromethanicum CM4, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_009138:51996551996554464624682Herminiimonas arsenicoxydans, complete genome5e-0661.9BLASTN svgBLASTP svg