Pre_GI: BLASTN Hits

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Query: NC_013929:8474195 Streptomyces scabiei 87.22 chromosome, complete genome

Start: 8474195, End: 8515685, Length: 41491

Host Lineage: Streptomyces scabiei; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a soil bacterium which is the causative agent of scab disease and affects a variety of underground vegetables such as potato and radish. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013131:997692999769291000446227534Catenulispora acidiphila DSM 44928, complete genome5e-148533BLASTN svgBLASTP svg
NC_018750:3141196*3141196316047319278Streptomyces venezuelae ATCC 10712, complete genome1e-117432BLASTN svgBLASTP svg
NC_015957:73482697348269739671748449Streptomyces violaceusniger Tu 4113 chromosome, complete genome7e-76293BLASTN svgBLASTP svg
NC_003888:13953191395319141826922951Streptomyces coelicolor A3(2), complete genome6e-55224BLASTN svgBLASTP svg
NC_014391:1812500*1812500186094748448Micromonospora aurantiaca ATCC 27029 chromosome, complete genome1e-49206BLASTN svgBLASTP svg
NC_014391:4672105*4672105470459932495Micromonospora aurantiaca ATCC 27029 chromosome, complete genome1e-49206BLASTN svgBLASTP svg
NC_014815:658893*65889368838329491Micromonospora sp. L5 chromosome, complete genome1e-49206BLASTN svgBLASTP svg
NC_003888:32134321345153919406Streptomyces coelicolor A3(2), complete genome2e-45192BLASTN svgBLASTP svg
NC_013235:13544431354443137485420412Nakamurella multipartita DSM 44233, complete genome3e-44188BLASTN svgBLASTP svg
NC_013235:2257899*2257899229859940701Nakamurella multipartita DSM 44233, complete genome2e-42182BLASTN svgBLASTP svg
NC_013235:40455894045589406814822560Nakamurella multipartita DSM 44233, complete genome2e-42182BLASTN svgBLASTP svg
NC_014151:40213944021394406852347130Cellulomonas flavigena DSM 20109 chromosome, complete genome1e-34157BLASTN svgBLASTP svg
NC_014814:13240413240415486122458Mycobacterium sp. Spyr1 chromosome, complete genome3e-32149BLASTN svgBLASTP svg
NC_008146:15358271535827156295027124Mycobacterium sp. MCS, complete genome2e-30143BLASTN svgBLASTP svg
NC_008146:15776041577604160675629153Mycobacterium sp. MCS, complete genome2e-30143BLASTN svgBLASTP svg
NC_008146:86131986131994414682828Mycobacterium sp. MCS, complete genome2e-30143BLASTN svgBLASTP svg
NC_008705:1022252*1022252104828626035Mycobacterium sp. KMS, complete genome2e-30143BLASTN svgBLASTP svg
NC_008705:15370801537080155764220563Mycobacterium sp. KMS, complete genome2e-30143BLASTN svgBLASTP svg
NC_008705:15577111557711161059952889Mycobacterium sp. KMS, complete genome2e-30143BLASTN svgBLASTP svg
NC_008705:27434*274345721729784Mycobacterium sp. KMS, complete genome2e-30143BLASTN svgBLASTP svg
NC_008705:5144433*5144433517009925667Mycobacterium sp. KMS, complete genome2e-30143BLASTN svgBLASTP svg
NC_008705:86862386862395099082368Mycobacterium sp. KMS, complete genome2e-30143BLASTN svgBLASTP svg
NC_009921:1645380*1645380166750622127Frankia sp. EAN1pec, complete genome2e-30143BLASTN svgBLASTP svg
NC_009921:3551036*3551036362235971324Frankia sp. EAN1pec, complete genome2e-30143BLASTN svgBLASTP svg
NC_015957:88163558816355883412317769Streptomyces violaceusniger Tu 4113 chromosome, complete genome7e-30141BLASTN svgBLASTP svg
NC_008595:22152442215244224973534492Mycobacterium avium 104, complete genome1e-28137BLASTN svgBLASTP svg
NC_008595:22528302252830227372020891Mycobacterium avium 104, complete genome1e-28137BLASTN svgBLASTP svg
NC_008705:17902221790222183895348732Mycobacterium sp. KMS, complete genome4e-28135BLASTN svgBLASTP svg
NC_013729:863743*86374390229738555Kribbella flavida DSM 17836, complete genome6e-27131BLASTN svgBLASTP svg
NC_009921:3384116*3384116340895324838Frankia sp. EAN1pec, complete genome1e-22117BLASTN svgBLASTP svg
NC_015957:33421693342169336097518807Streptomyces violaceusniger Tu 4113 chromosome, complete genome4e-22115BLASTN svgBLASTP svg
NC_000962:34740003474000349418120182Mycobacterium tuberculosis H37Rv, complete genome1e-21113BLASTN svgBLASTP svg
NC_002755:34655823465582349023924658Mycobacterium tuberculosis CDC1551, complete genome1e-21113BLASTN svgBLASTP svg
NC_002945:34293153429315345013820824Mycobacterium bovis AF2122/97, complete genome1e-21113BLASTN svgBLASTP svg
NC_008769:34272543427254344807620823Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome1e-21113BLASTN svgBLASTP svg
NC_009525:34849243484924350559920676Mycobacterium tuberculosis H37Ra, complete genome1e-21113BLASTN svgBLASTP svg
NC_009565:34857723485772350477419003Mycobacterium tuberculosis F11, complete genome1e-21113BLASTN svgBLASTP svg
NC_012207:34211443421144344072619583Mycobacterium bovis BCG str. Tokyo 172, complete genome1e-21113BLASTN svgBLASTP svg
NC_008726:49476949476951509920331Mycobacterium vanbaalenii PYR-1, complete genome2e-20109BLASTN svgBLASTP svg
NC_012803:15191381519138153782318686Micrococcus luteus NCTC 2665, complete genome9e-20107BLASTN svgBLASTP svg
NC_008268:34180003418000344059922600Rhodococcus sp. RHA1, complete genome1e-18103BLASTN svgBLASTP svg
NC_009921:38549693854969389148136513Frankia sp. EAN1pec, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_013757:1888850*1888850193149042641Geodermatophilus obscurus DSM 43160, complete genome9e-1797.6BLASTN svgBLASTP svg
NC_013757:27068352706835275100644172Geodermatophilus obscurus DSM 43160, complete genome9e-1797.6BLASTN svgBLASTP svg
NC_013757:30121303012130303570423575Geodermatophilus obscurus DSM 43160, complete genome9e-1797.6BLASTN svgBLASTP svg
NC_013757:36897336897341230243330Geodermatophilus obscurus DSM 43160, complete genome9e-1797.6BLASTN svgBLASTP svg
NC_012803:17531381753138177628023143Micrococcus luteus NCTC 2665, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_011662:23201002320100236647446375Thauera sp. MZ1T, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_013595:18512261851226187265321428Streptosporangium roseum DSM 43021, complete genome5e-1591.7BLASTN svgBLASTP svg
NC_015434:666692*66669270459937908Verrucosispora maris AB-18-032 chromosome, complete genome5e-1591.7BLASTN svgBLASTP svg
NC_009512:32515453251545327720325659Pseudomonas putida F1, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_008313:19565001956500197559919100Ralstonia eutropha H16 chromosome 1, complete sequence1e-1283.8BLASTN svgBLASTP svg
NC_003888:7866148*7866148789016824021Streptomyces coelicolor A3(2), complete genome1e-1283.8BLASTN svgBLASTP svg
NC_008726:38582093858209387826620058Mycobacterium vanbaalenii PYR-1, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_013169:1845735*1845735186893023196Kytococcus sedentarius DSM 20547, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_013169:513327*51332754059927273Kytococcus sedentarius DSM 20547, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_015312:1191633*1191633121600524373Pseudonocardia dioxanivorans CB1190 chromosome, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_008268:75763657576365760084724483Rhodococcus sp. RHA1, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_008271:24837124837127209923729Rhodococcus sp. RHA1 plasmid pRHL3, complete sequence2e-1179.8BLASTN svgBLASTP svg
NC_009921:52200052200056210240103Frankia sp. EAN1pec, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_011666:15724871572487160176329277Methylocella silvestris BL2, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_013947:19569231956923198076223840Stackebrandtia nassauensis DSM 44728 chromosome, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_018581:17180231718023176570647684Gordonia sp. KTR9 chromosome, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_013235:40911854091185411164620462Nakamurella multipartita DSM 44233, complete genome8e-1177.8BLASTN svgBLASTP svg
NC_012803:1094679*1094679111581321135Micrococcus luteus NCTC 2665, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_015671:1678088*1678088170223524148Cellvibrio gilvus ATCC 13127 chromosome, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_009664:4423829*44238294686013262185Kineococcus radiotolerans SRS30216, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_009921:52756945275694530509929406Frankia sp. EAN1pec, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_019940:1670262*1670262169388723626Thioflavicoccus mobilis 8321 chromosome, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_015656:2484749*2484749251548430736Frankia symbiont of Datisca glomerata chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_006177:12546351254635128152926895Symbiobacterium thermophilum IAM 14863, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_009921:43990004399000442459925600Frankia sp. EAN1pec, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_013235:39130003913000393222419225Nakamurella multipartita DSM 44233, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_013521:94049594049596409923605Sanguibacter keddieii DSM 10542, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_013530:3365742*3365742338937923638Xylanimonas cellulosilytica DSM 15894, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_014210:41884484188448421709828651Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,8e-0867.9BLASTN svgBLASTP svg
NC_015859:37050037050038932118822Corynebacterium variabile DSM 44702 chromosome, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_015953:40455004045500406559920100Streptomyces sp. SirexAA-E chromosome, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_008146:49362624936262495578719526Mycobacterium sp. MCS, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_008705:49754024975402499824322842Mycobacterium sp. KMS, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_013093:31578973157897318209324197Actinosynnema mirum DSM 43827, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_013716:12989321298932132714328212Citrobacter rodentium ICC168, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_014831:23975632397563242026622704Thermaerobacter marianensis DSM 12885 chromosome, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_011894:2747491*2747491277359926109Methylobacterium nodulans ORS 2060, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_013172:31417393141739316451822780Brachybacterium faecium DSM 4810, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_014168:1724993*1724993175913834146Segniliparus rotundus DSM 44985 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_014761:1321187*1321187134459923413Oceanithermus profundus DSM 14977 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_015976:2900891*2900891292514524255Sphingobium sp. SYK-6, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_015312:63989316398931641727718347Pseudonocardia dioxanivorans CB1190 chromosome, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_010159:2546590*2546590256968123092Yersinia pestis Angola, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_004088:2491303*2491303251808626784Yersinia pestis KIM, complete genome5e-0661.9BLASTN svgBLASTP svg