Pre_GI Gene

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Host: NC_015957 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015957:8816355 Streptomyces violaceusniger Tu 4113 chromosome, complete genome

Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
88158468816358513hypothetical protein
88163558816855501hypothetical protein
88168668817072207hypothetical protein
88171368817906771peptidoglycan-binding lysin domain-containing proteinQuickGO ontologyBLASTP
88179858818236252hypothetical protein
88182458818511267hypothetical protein
88185088819197690Collagen triple helix repeat-containing proteinQuickGO ontology
881952288222482727pyruvate phosphate dikinaseQuickGO ontologyBLASTP
88241298824830702hypothetical protein
882468488278813198Lanthionine synthetase C family proteinQuickGO ontologyBLASTP
88280078828171165hypothetical protein
882838388309142532hypothetical proteinBLASTP
88309638831751789ABC transporter-like proteinQuickGO ontologyBLASTP
883198388324504683-Oxoacyl-acyl-carrier-protein ACP synthase III domain-containing proteinQuickGO ontologyBLASTP
883290388341231221TIM-barrel protein nifR3 familyQuickGO ontologyBLASTP