Pre_GI Gene

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Host: NC_008146 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008146:1535827 Mycobacterium sp. MCS, complete genome

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
153582715392523426transcriptional regulator SARP familyQuickGO ontologyBLASTP
153935515407431389FAD linked oxidase-like proteinQuickGO ontologyBLASTP
15413291542120792hypothetical proteinBLASTP
154220915434561248transposase mutator typeQuickGO ontologyBLASTP
15435761543893318hypothetical proteinBLASTP
15441191544985867hypothetical proteinBLASTP
154498215463101329phage integraseQuickGO ontologyBLASTP
15464821547291810hypothetical proteinBLASTP
15479711548699729hypothetical proteinBLASTP
15487391548993255hypothetical proteinBLASTP
15491181549369252hypothetical proteinBLASTP
15495481550126579hypothetical proteinBLASTP
155012615525762451hypothetical proteinBLASTP
15525731553334762hypothetical proteinBLASTP
155340315579744572ATP-dependent exoDNAse exonuclease V alpha subunit - helicase superfamily I member-like proteinQuickGO ontologyBLASTP
15581791558745567hypothetical proteinBLASTP
15589501559531582hypothetical proteinBLASTP
15598151560789975hypothetical proteinBLASTP
15608441561617774transcriptional regulator AraC familyQuickGO ontologyBLASTP
156186515629501086NLPP60QuickGO ontologyBLASTP