Pre_GI Gene

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Host: NC_008146 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008146:4936262 Mycobacterium sp. MCS, complete genome

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
493626249373231062pyruvate carboxyltransferaseQuickGO ontologyBLASTP
49373204938252933Semialdehyde dehydrogenase NAD - binding proteinQuickGO ontologyBLASTP
493828149390667864-oxalocrotonate decarboxylaseQuickGO ontologyBLASTP
493919149408311641fumarate reductasesuccinate dehydrogenase flavoprotein-like proteinQuickGO ontologyBLASTP
49408344941694861MaoC-like dehydrataseQuickGO ontologyBLASTP
49418224942190369hypothetical proteinBLASTP
494231749448722556Mur ligase middle regionQuickGO ontologyBLASTP
494502449464481425Integrase catalytic regionQuickGO ontologyBLASTP
494631649476981383hypothetical proteinBLASTP
494812449492121089hypothetical proteinBLASTP
494956249507191158AAA ATPase containing von Willebrand factor type A vWA domain-like proteinQuickGO ontologyBLASTP
49513334952016684hypothetical proteinBLASTP
495204449531921149PPE family proteinQuickGO ontologyBLASTP
495327649544331158lipid-transfer proteinQuickGO ontologyBLASTP
49544334954834402MaoC-like dehydrataseQuickGO ontologyBLASTP
49548314955787957protein of unknown function DUF35QuickGO ontologyBLASTP