Pre_GI: BLASTN Hits

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Query: NC_013893:830282 Staphylococcus lugdunensis HKU09-01 chromosome, complete genome

Start: 830282, End: 853599, Length: 23318

Host Lineage: Staphylococcus lugdunensis; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: Complete genome sequencing of Staphylococcus lugdunensis strain HKU09-01 isolated from a patient suffering from skin and soft tissue infection. Staphylococcus lugdunensis is known to be a pathogenic member of the coagulase-negative staphylococci, causing skin and soft tissue infections, catheter-related bacteremia, native valve endocardititis and osteomyelitis.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007168:813957*81395783855024594Staphylococcus haemolyticus JCSC1435, complete genome07444BLASTN svgBLASTP svg
NC_020164:701151*70115172886827718Staphylococcus warneri SG1, complete genome06268BLASTN svgBLASTP svg
NC_002976:1844901*1844901187401629116Staphylococcus epidermidis RP62A, complete genome06018BLASTN svgBLASTP svg
NC_004461:1849176*1849176187898629811Staphylococcus epidermidis ATCC 12228, complete genome06003BLASTN svgBLASTP svg
NC_002953:2282236*2282236231132529090Staphylococcus aureus subsp. aureus MSSA476, complete genome05911BLASTN svgBLASTP svg
NC_002952:2390668*2390668241976729100Staphylococcus aureus subsp. aureus MRSA252, complete genome05872BLASTN svgBLASTP svg
NC_007622:2239799*2239799227094331145Staphylococcus aureus RF122, complete genome05856BLASTN svgBLASTP svg
NC_009782:2362000*2362000237977917780Staphylococcus aureus subsp. aureus Mu3, complete genome05699BLASTN svgBLASTP svg
NC_012121:1728913*1728913174659917687Staphylococcus carnosus subsp. carnosus TM300, complete genome05448BLASTN svgBLASTP svg
NC_007350:692041*69204171972727687Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305,05309BLASTN svgBLASTP svg
NC_007793:2352953*2352953237101718065Staphylococcus aureus subsp. aureus USA300, complete genome05176BLASTN svgBLASTP svg
NC_003923:2301234*2301234231971018477Staphylococcus aureus subsp. aureus MW2, complete genome05176BLASTN svgBLASTP svg
NC_002951:2288674*2288674230711718444Staphylococcus aureus subsp. aureus COL, complete genome05095BLASTN svgBLASTP svg
NC_014925:1970500*1970500198985319354Staphylococcus pseudintermedius HKU10-03 chromosome, complete04666BLASTN svgBLASTP svg
NC_010079:2352691*2352691237059917909Staphylococcus aureus subsp. aureus USA300_TCH1516, complete04615BLASTN svgBLASTP svg
NC_007795:2299327*2299327231711417788Staphylococcus aureus subsp. aureus NCTC 8325, complete genome04520BLASTN svgBLASTP svg
NC_002745:2289829*2289829230761617788Staphylococcus aureus subsp. aureus N315, complete genome04504BLASTN svgBLASTP svg
NC_002758:2359329*2359329237711617788Staphylococcus aureus subsp. aureus Mu50, complete genome04504BLASTN svgBLASTP svg
NC_011999:198769*19876922025721489Macrococcus caseolyticus JCSC5402, complete genome01491BLASTN svgBLASTP svg
NC_004668:191732*19173221421422483Enterococcus faecalis V583, complete genome2e-68268BLASTN svgBLASTP svg
NC_020995:245671*24567126941823748Enterococcus casseliflavus EC20, complete genome4e-64254BLASTN svgBLASTP svg
NC_004193:119737*11973716514845412Oceanobacillus iheyensis HTE831, complete genome8e-59236BLASTN svgBLASTP svg
NC_013656:2382000*2382000240458622587Lactococcus lactis subsp. lactis KF147, complete genome2e-53218BLASTN svgBLASTP svg
NC_015391:2523451*2523451255656933119Carnobacterium sp. 17-4 chromosome, complete genome8e-53216BLASTN svgBLASTP svg
NC_015516:131564*13156415661425051Melissococcus plutonius ATCC 35311, complete genome3e-52214BLASTN svgBLASTP svg
NC_008555:2597980*2597980262082422845Listeria welshimeri serovar 6b str. SLCC5334, complete genome8e-50206BLASTN svgBLASTP svg
NC_011134:51218*512187644125224Streptococcus equi subsp. zooepidemicus str. MGCS10565, complete1e-39172BLASTN svgBLASTP svg
NC_015601:1229909*1229909125272022812Erysipelothrix rhusiopathiae str. Fujisawa, complete genome6e-35157BLASTN svgBLASTP svg
NC_012471:51305*513057507523771Streptococcus equi subsp. equi 4047, complete genome6e-35157BLASTN svgBLASTP svg
NC_014829:133305*13330517500741703Bacillus cellulosilyticus DSM 2522 chromosome, complete genome2e-34155BLASTN svgBLASTP svg
NC_018704:124823*12482314364118819Amphibacillus xylanus NBRC 15112, complete genome1e-33153BLASTN svgBLASTP svg
NC_015275:3846260*3846260387224625987Clostridium lentocellum DSM 5427 chromosome, complete genome1e-29139BLASTN svgBLASTP svg
NC_015555:327562*32756238328255721Thermoanaerobacterium xylanolyticum LX-11 chromosome, complete6e-29137BLASTN svgBLASTP svg
NC_007929:1463295*1463295150502641732Lactobacillus salivarius subsp. salivarius UCC118, complete genome9e-28133BLASTN svgBLASTP svg
NC_014209:1910109*1910109194573835630Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,3e-24121BLASTN svgBLASTP svg
NC_013921:1977444*1977444203224454801Thermoanaerobacter italicus Ab9 chromosome, complete genome3e-24121BLASTN svgBLASTP svg
NC_015958:2251619*2251619232072969111Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genome2e-22115BLASTN svgBLASTP svg
NC_014964:388458*38845844542856971Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, complete2e-22115BLASTN svgBLASTP svg
NC_009437:2367842*2367842241150043659Caldicellulosiruptor saccharolyticus DSM 8903, complete genome1e-20109BLASTN svgBLASTP svg
NC_006448:1709523*1709523173288623364Streptococcus thermophilus LMG 18311, complete genome5e-20107BLASTN svgBLASTP svg
NC_014410:403776*40377646022156446Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,2e-19105BLASTN svgBLASTP svg
NC_013406:6422000*6422000644307321074Paenibacillus sp. Y412MC10 chromosome, complete genome8e-19103BLASTN svgBLASTP svg
NC_012781:379200*37920039812018921Eubacterium rectale ATCC 33656, complete genome8e-19103BLASTN svgBLASTP svg
NC_003030:3251941*3251941329013838198Clostridium acetobutylicum ATCC 824, complete genome3e-18101BLASTN svgBLASTP svg
NC_003366:2731995*2731995276168829694Clostridium perfringens str. 13, complete genome3e-18101BLASTN svgBLASTP svg
NC_008261:2957354*2957354298433226979Clostridium perfringens ATCC 13124, complete genome3e-18101BLASTN svgBLASTP svg
NC_008262:2598920*2598920264903950120Clostridium perfringens SM101, complete genome3e-18101BLASTN svgBLASTP svg
NC_010516:3759136*3759136379956240427Clostridium botulinum B1 str. Okra, complete genome3e-18101BLASTN svgBLASTP svg
NC_010520:3788702*3788702382916340462Clostridium botulinum A3 str. Loch Maree, complete genome3e-18101BLASTN svgBLASTP svg
NC_012563:3956500*3956500399649139992Clostridium botulinum A2 str. Kyoto, complete genome3e-18101BLASTN svgBLASTP svg
NC_015687:3252233*3252233329176539533Clostridium acetobutylicum DSM 1731 chromosome, complete genome3e-18101BLASTN svgBLASTP svg
NC_014657:1540500*1540500155862118122Caldicellulosiruptor owensensis OL chromosome, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_014392:969498*969498100915039653Caldicellulosiruptor obsidiansis OB47 chromosome, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_019970:336472*33647241533078859Thermoanaerobacterium thermosaccharolyticum M0795, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_006055:140686*14068617078530100Mesoplasma florum L1, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_009089:87581*8758110818120601Clostridium difficile 630, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_013316:81969*8196911125629288Clostridium difficile R20291, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_015520:2280643*2280643230563624994Mahella australiensis 50-1 BON chromosome, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_010723:223935*22393527475150817Clostridium botulinum E3 str. Alaska E43, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_002162:268049*26804929736629318Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_014393:4482896*4482896452909946204Clostridium cellulovorans 743B chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_009613:1505548*1505548152570320156Flavobacterium psychrophilum JIP02/86, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_007633:790881*79088182774836868Mycoplasma capricolum subsp. capricolum ATCC 27343, complete2e-1385.7BLASTN svgBLASTP svg
NC_009922:542500*54250057462332124Alkaliphilus oremlandii OhILAs, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_013171:1677543*1677543171632938787Anaerococcus prevotii DSM 20548, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_014721:1777644*1777644181600538362Caldicellulosiruptor kristjanssonii 177R1B chromosome, complete2e-1385.7BLASTN svgBLASTP svg
NC_014751:772912*77291280869035779Mycoplasma leachii PG50 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_015949:1180755*1180755121693036176Caldicellulosiruptor lactoaceticus 6A chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_018664:2357882*2357882238773229851Clostridium acidurici 9a chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_014652:1032711*1032711107395141241Caldicellulosiruptor hydrothermalis 108 chromosome, complete7e-1383.8BLASTN svgBLASTP svg
NC_014448:487381*48738151116023780Mycoplasma hyorhinis HUB-1 chromosome, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_015703:1898159*1898159193254934391Runella slithyformis DSM 19594 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_015759:536929*53692955509918171Weissella koreensis KACC 15510 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_019814:125611*12561117345647846Candidatus Kinetoplastibacterium blastocrithidii (ex Strigomonas1e-1179.8BLASTN svgBLASTP svg
NC_010674:222016*22201625822836213Clostridium botulinum B str. Eklund 17B, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_010001:4486170*4486170451730531136Clostridium phytofermentans ISDg, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_005364:817786*81778684063422849Mycoplasma mycoides subsp. mycoides SC str. PG1, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_003869:2143892*2143892219937255481Thermoanaerobacter tengcongensis MB4, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014760:299392*29939232976830377Mycoplasma bovis PG45 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_015725:670719*67071969912728409Mycoplasma bovis Hubei-1 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_014614:2295131*2295131232283227702Clostridium sticklandii, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010376:186510*18651024309956590Finegoldia magna ATCC 29328, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_004829:64000*640008360419605Mycoplasma gallisepticum R, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_012034:1783912*1783912182367039759Anaerocellum thermophilum DSM 6725, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_014720:1140765*1140765116059919835Caldicellulosiruptor kronotskyensis 2002 chromosome, complete7e-1073.8BLASTN svgBLASTP svg
NC_016012:1380260*1380260140143821179Candidatus Arthromitus sp. SFB-rat-Yit, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_020291:166500*16650019679930300Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome7e-1073.8BLASTN svgBLASTP svg
NC_020299:764526*76452681749952974Candidatus Kinetoplastibacterium oncopeltii TCC290E, complete7e-1073.8BLASTN svgBLASTP svg
NC_005027:4180502*4180502420480624305Rhodopirellula baltica SH 1, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008255:3578883*3578883360220323321Cytophaga hutchinsonii ATCC 33406, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_013771:1171251*1171251120363132381Cyanobacterium UCYN-A, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014109:393500*39350043671343214Candidatus Riesia pediculicola USDA chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014328:4387303*4387303445852771225Clostridium ljungdahlii ATCC 49587 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014538:1998180*1998180202679728618Thermoanaerobacter sp. X513 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014921:688978*68897871809929122Mycoplasma fermentans M64 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015061:366552*36655238559319042Rahnella sp. Y9602 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015913:1491393*1491393153098039588Candidatus Arthromitus sp. SFB-mouse-Japan, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_016024:1764516*1764516180484640331Candidatus Chloracidobacterium thermophilum B chromosome chromosome3e-0971.9BLASTN svgBLASTP svg
NC_004557:2711702*2711702274444632745Clostridium tetani E88, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010336:607145*60714562584218698Francisella philomiragia subsp. philomiragia ATCC 25017, complete1e-0869.9BLASTN svgBLASTP svg
NC_013192:232778*23277828299350216Leptotrichia buccalis DSM 1135, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_018515:223164*22316424765124488Desulfosporosinus meridiei DSM 13257 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_013893:51122251122253420922988Staphylococcus lugdunensis HKU09-01 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_012225:2421783*2421783245309931317Brachyspira hyodysenteriae WA1, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010718:193231*19323123794944719Natranaerobius thermophilus JW/NM-WN-LF, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_007716:517356*51735654065723302Aster yellows witches'-broom phytoplasma AYWB, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012806:105133*10513314579440662Mycoplasma conjunctivae, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013216:293571*29357131635022780Desulfotomaculum acetoxidans DSM 771, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015185:174847*17484719343818592Desulfurobacterium thermolithotrophum DSM 11699 chromosome,2e-0765.9BLASTN svgBLASTP svg
NC_019978:178277*17827721455436278Halobacteroides halobius DSM 5150, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007205:1059684*1059684108783428151Candidatus Pelagibacter ubique HTCC1062, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_009802:1886000*1886000190809922100Campylobacter concisus 13826, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_011047:416566*41656644108124516Candidatus Phytoplasma mali, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_011978:975333*975333100082825496Thermotoga neapolitana DSM 4359, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014497:180000*18000020623126232Candidatus Zinderia insecticola CARI chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014752:98117*9811712709928983Neisseria lactamica ST-640, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015696:220798*22079825652935732Francisella sp. TX077308 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_016002:379692*37969240188922198Pseudogulbenkiania sp. NH8B, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_011899:124500*12450014268218183Halothermothrix orenii H 168, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014014:117925*11792514454326619Mycoplasma crocodyli MP145 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014152:305955*30595532559919645Thermincola sp. JR, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014758:1546898*1546898157379926902Calditerrivibrio nitroreducens DSM 19672 chromosome, complete3e-0661.9BLASTN svgBLASTP svg
NC_014932:985882*985882103391148030Bartonella clarridgeiae 73, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015731:2950874*2950874299427243399Nitrosomonas sp. Is79A3 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_016001:2980245*2980245300490924665Flavobacterium branchiophilum, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010546:4144449*4144449416731722869Cyanothece sp. ATCC 51142 chromosome circular, complete sequence3e-0661.9BLASTN svgBLASTP svg