Pre_GI: BLASTN Hits

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Query: NC_012731:5074000 Klebsiella pneumoniae NTUH-K2044 chromosome, complete genome

Start: 5074000, End: 5096127, Length: 22128

Host Lineage: Klebsiella pneumoniae; Klebsiella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a liver abscess. This organism is the most medically important organism within the genus Klebsiella. It is an environmental organism found in water, soil, and on the surface of plants. Several strains have been isolated from plant tissues and are nitrogen-fixing endophytes that may be a source of nitrogen for the plant. Other strains can become opportunistic pathogens which infect humans, and typically causes hospital-acquired infections in immunocompromised patients. Major sites of infection include the lungs, where it causes a type of pneumonia, and urinary tract infections. Klebsiella can also enter the bloodstream (bacterimia) and cause sepsis. The pathogen can also infect animals and cause inflammation of the uterus in horses as well as more generalized infections in other mammals. This organism expresses numerous pathogenicity factors, including multiple adhesins, capsular polysaccharide, siderophores, and lipopolysaccharide for the evasion of host defenses. The multiple antibiotic resistance genes carried on the chromosome inhibit efforts to clear the organism from infected patients via antibiotic use.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009648:4359875*4359875438125321379Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome040880BLASTN svgBLASTP svg
NC_013850:109500*10950013209922600Klebsiella variicola At-22 chromosome, complete genome012840BLASTN svgBLASTP svg
NC_013716:4306695*4306695439827491580Citrobacter rodentium ICC168, complete genome03126BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome02910BLASTN svgBLASTP svg
NC_020260:4029951*4029951405110621156Cronobacter sakazakii Sp291, complete genome02434BLASTN svgBLASTP svg
NC_015968:74124*7412410053226409Enterobacter asburiae LF7a chromosome, complete genome02422BLASTN svgBLASTP svg
NC_009778:40140264014026404423330208Enterobacter sakazakii ATCC BAA-894, complete genome02389BLASTN svgBLASTP svg
NC_020064:4751097*4751097477659925503Serratia marcescens FGI94, complete genome01873BLASTN svgBLASTP svg
NC_010468:49074*490746937320300Escherichia coli ATCC 8739, complete genome01867BLASTN svgBLASTP svg
NC_010694:63654*636548609922446Erwinia tasmaniensis, complete genome01592BLASTN svgBLASTP svg
NC_013961:73037*7303710749134455Erwinia amylovora, complete genome01495BLASTN svgBLASTP svg
NC_013282:4312791*4312791433597423184Cronobacter turicensis, complete genome01481BLASTN svgBLASTP svg
NC_013956:43263884326388435118724800Pantoea ananatis LMG 20103 chromosome, complete genome01376BLASTN svgBLASTP svg
NC_009832:5369566*5369566539353223967Serratia proteamaculans 568, complete genome01368BLASTN svgBLASTP svg
NC_013508:26348*263485519528848Edwardsiella tarda EIB202, complete genome01350BLASTN svgBLASTP svg
NC_009792:46589094658909468286123953Citrobacter koseri ATCC BAA-895, complete genome0724BLASTN svgBLASTP svg
NC_010102:38515003851500387645224953Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,0662BLASTN svgBLASTP svg
NC_002655:4606000*4606000462939223393Escherichia coli O157:H7 EDL933, complete genome0660BLASTN svgBLASTP svg
NC_002695:4537000*4537000455962722628Escherichia coli O157:H7 str. Sakai, complete genome0660BLASTN svgBLASTP svg
NC_003197:3902500*3902500392838425885Salmonella typhimurium LT2, complete genome0656BLASTN svgBLASTP svg
NC_010473:3883701*3883701391159927899Escherichia coli str. K-12 substr. DH10B, complete genome0652BLASTN svgBLASTP svg
NC_000913:3786124*3786124381459928476Escherichia coli K12, complete genome0652BLASTN svgBLASTP svg
NC_006511:3690828*3690828371609925272Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC1e-180640BLASTN svgBLASTP svg
NC_011149:3822000*3822000384676224763Salmonella enterica subsp. enterica serovar Agona str. SL483,6e-180638BLASTN svgBLASTP svg
NC_007613:3637832*3637832366214824317Shigella boydii Sb227, complete genome2e-179636BLASTN svgBLASTP svg
CU928160:3862935*3862935388577322839Escherichia coli IAI1 chromosome, complete genome2e-179636BLASTN svgBLASTP svg
NC_006905:3845000*3845000386969524696Salmonella enterica subsp. enterica serovar Choleraesuis str8e-173615BLASTN svgBLASTP svg
NC_011080:3875320*3875320390054525226Salmonella enterica subsp. enterica serovar Newport str. SL254,8e-173615BLASTN svgBLASTP svg
NC_011748:4167043*4167043419159624554Escherichia coli 55989, complete genome5e-165589BLASTN svgBLASTP svg
CU928145:4167043*4167043419159624554Escherichia coli 55989 chromosome, complete genome5e-165589BLASTN svgBLASTP svg
CP002185:3998112*3998112402163723526Escherichia coli W, complete genome4e-159569BLASTN svgBLASTP svg
NC_005126:274000*27400029651122512Photorhabdus luminescens subsp. laumondii TTO1, complete genome7e-155555BLASTN svgBLASTP svg
NC_004337:3761865*3761865378609924235Shigella flexneri 2a str. 301, complete genome3e-154553BLASTN svgBLASTP svg
NC_007606:3784847*3784847380859923753Shigella dysenteriae Sd197, complete genome3e-154553BLASTN svgBLASTP svg
NC_008253:3896704*3896704392023823535Escherichia coli 536, complete genome3e-154553BLASTN svgBLASTP svg
NC_009800:3821824*3821824384534923526Escherichia coli HS, complete genome3e-154553BLASTN svgBLASTP svg
NC_010498:4031500*4031500405311121612Escherichia coli SMS-3-5, complete genome3e-154553BLASTN svgBLASTP svg
NC_011751:4251296*4251296427504623751Escherichia coli UMN026 chromosome, complete genome3e-154553BLASTN svgBLASTP svg
NC_011750:4307166*4307166433102623861Escherichia coli IAI39 chromosome, complete genome6e-152545BLASTN svgBLASTP svg
NC_010658:3774110*3774110379937225263Shigella boydii CDC 3083-94, complete genome6e-152545BLASTN svgBLASTP svg
NC_009801:4108179*4108179413170423526Escherichia coli E24377A, complete genome6e-152545BLASTN svgBLASTP svg
NC_008563:40835584083558410710723550Escherichia coli APEC O1, complete genome6e-152545BLASTN svgBLASTP svg
NC_004431:4223232*4223232424609922868Escherichia coli CFT073, complete genome6e-152545BLASTN svgBLASTP svg
NC_011083:3915500*3915500393961024111Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,4e-150539BLASTN svgBLASTP svg
NC_007946:4050762*4050762407361822857Escherichia coli UTI89, complete genome2e-149537BLASTN svgBLASTP svg
NC_011740:4007000*4007000403180124802Escherichia fergusonii ATCC 35469, complete genome4e-147529BLASTN svgBLASTP svg
NC_012917:46464914646491466766521175Pectobacterium carotovorum subsp. carotovorum PC1, complete genome1e-91345BLASTN svgBLASTP svg
NC_013421:4790696*4790696482022829533Pectobacterium wasabiae WPP163, complete genome7e-84319BLASTN svgBLASTP svg
NC_004547:13850013850015906820569Erwinia carotovora subsp. atroseptica SCRI1043, complete genome1e-82315BLASTN svgBLASTP svg
NC_014500:46919154691915472059528681Dickeya dadantii 3937 chromosome, complete genome5e-63250BLASTN svgBLASTP svg
NC_012880:13550813550816052825021Dickeya dadantii Ech703, complete genome3e-40174BLASTN svgBLASTP svg
NC_004741:3992384*3992384401736124978Shigella flexneri 2a str. 2457T, complete genome1e-26129BLASTN svgBLASTP svg
AC_000091:3827856*3827856385515527300Escherichia coli W3110 DNA, complete genome3e-24121BLASTN svgBLASTP svg
AP010958:4668181*4668181469259924419Escherichia coli O103:H2 str. 12009 DNA, complete genome3e-24121BLASTN svgBLASTP svg
NC_008258:3995553*3995553402149425942Shigella flexneri 5 str. 8401, complete genome3e-24121BLASTN svgBLASTP svg
NC_008700:367949*36794939264724699Shewanella amazonensis SB2B, complete genome1e-23119BLASTN svgBLASTP svg
NC_014973:1257625*1257625128014722523Geobacter sp. M18 chromosome, complete genome7e-1693.7BLASTN svgBLASTP svg
NC_004547:164000*16400019143427435Erwinia carotovora subsp. atroseptica SCRI1043, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_003295:26694802669480269721727738Ralstonia solanacearum GMI1000, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_008609:2446246*2446246249438248137Pelobacter propionicus DSM 2379, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_013456:21215021215023428822139Vibrio sp. Ex25 chromosome 1, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_010545:1691999*1691999172113729139Corynebacterium urealyticum DSM 7109, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_012721:16359991635999166922033222Burkholderia glumae BGR1 chromosome 2, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_018691:198909*19890923147832570Alcanivorax dieselolei B5 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_004631:3910451*3910451393705126601Salmonella enterica subsp. enterica serovar Typhi Ty2, complete3e-0971.9BLASTN svgBLASTP svg
NC_003198:3924952*3924952395155226601Salmonella enterica subsp. enterica serovar Typhi str. CT18,3e-0971.9BLASTN svgBLASTP svg
NC_009138:2110500*2110500213274722248Herminiimonas arsenicoxydans, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007963:35740003574000359672322724Chromohalobacter salexigens DSM 3043, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014121:40431984043198407122728030Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete3e-0661.9BLASTN svgBLASTP svg
NC_007760:3848190*3848190387276224573Anaeromyxobacter dehalogenans 2CP-C, complete genome3e-0661.9BLASTN svgBLASTP svg