Pre_GI Gene

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Host: NC_008700 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008700:367949 Shewanella amazonensis SB2B, complete genome

Host Lineage: Shewanella amazonensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from shallow marine deposits (coastal shelf mud) of the Amazon River delta off of the coast of Brazil. Iron-reducing bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella amazonensis is capable of anaerobically reducing iron, manganese, and sulfur compounds and may be important to the cycling of these compounds in the environment.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
3653613679522592glycoside hydrolase family 2 sugar bindingQuickGO ontologyBLASTP
3679493697391791Nasolute symporterQuickGO ontologyBLASTP
3697393720602322putative alpha-12-mannosidaseQuickGO ontologyBLASTP
373058373450393hypothetical proteinBLASTP
373545373943399conserved hypothetical proteinBLASTP
374308374574267hypothetical protein
374607375368762phosphoesterase related to the Icc proteinQuickGO ontologyBLASTP
375449375751303hypothetical protein
375859376374516conserved hypothetical proteinBLASTP
376741377334594protein of unknown function DUF159QuickGO ontologyBLASTP
377512378216705hypothetical proteinBLASTP
378604379386783DNA topoisomerase IQuickGO ontologyBLASTP
379556379834279hypothetical protein
380381380974594protein of unknown function DUF159QuickGO ontologyBLASTP
381108381935828hypothetical proteinBLASTP
383200384138939conserved hypothetical proteinBLASTP
3848133863601548hypothetical proteinBLASTP
386521387450930conserved hypothetical proteinBLASTP
387592388305714tRNA nucleotidyltransferaseQuickGO ontologyBLASTP
388412389053642Orotate phosphoribosyltransferaseQuickGO ontologyBLASTP
389155389805651GTP cyclohydrolase IQuickGO ontologyBLASTP
3899883919371950prolyl oligopeptidase family proteinQuickGO ontologyBLASTP
392054392647594putative transcriptional regulator TetR familyQuickGO ontologyBLASTP