Pre_GI: BLASTN Hits

Some Help

Query: NC_012560:4350465 Azotobacter vinelandii DJ, complete genome

Start: 4350465, End: 4373779, Length: 23315

Host Lineage: Azotobacter vinelandii; Azotobacter; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism was first isolated from the soil in Vineland, New Jersey, although it is found worldwide. It is a large obligate aerobe that has one of the highest respiratory rates of any organism. Azotobacter vinelandii also produces a number of unusual nitrogenases which allow it to fix atmospheric nitrogen to ammonia, a compound it can then use as a nitrogen source. It protects the oxygen-sensitive nitrogenase enzymes through its high respiratory rate, which sequesters the nitrogenase complexes in an anoxic environment. This organism has a number of unusual characteristics. Under extreme environmental conditions, the cell will produce a cyst that is resistant to dessication and is surrounded by two capsular polysaccharide layers. This organism produces two industrially important polysaccharides, poly-beta-hydroxybutyrate (PHB) and alginate. PHB is a thermoplastic biopolymer, and alginate is used in the food industry. Alginate is also used by the pathogen Pseudomonas aeruginosa to infect the lungs of cystic fibrosis patients.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_021150:43504614350461437377523315Azotobacter vinelandii CA6, complete genome017400BLASTN svgBLASTP svg
NC_009434:3611738*36117383748875137138Pseudomonas stutzeri A1501, complete genome01354BLASTN svgBLASTP svg
NC_002947:53864895386489541416727679Pseudomonas putida KT2440, complete genome01148BLASTN svgBLASTP svg
NC_010501:73436373436376909934737Pseudomonas putida W619, complete genome0942BLASTN svgBLASTP svg
NC_004129:92647992647994509918621Pseudomonas fluorescens Pf-5, complete genome0900BLASTN svgBLASTP svg
NC_008027:77589677589680259926704Pseudomonas entomophila L48, complete genome0888BLASTN svgBLASTP svg
NC_007492:85742885742888733529908Pseudomonas fluorescens PfO-1, complete genome1e-147531BLASTN svgBLASTP svg
NC_012660:57932005793200583260939410Pseudomonas fluorescens SBW25 chromosome, complete genome4e-138500BLASTN svgBLASTP svg
NC_018691:28636592863659289037626718Alcanivorax dieselolei B5 chromosome, complete genome2e-136494BLASTN svgBLASTP svg
NC_002516:89100089100091357122572Pseudomonas aeruginosa PAO1, complete genome2e-130474BLASTN svgBLASTP svg
NC_008463:47432964743296476909925804Pseudomonas aeruginosa UCBPP-PA14, complete genome2e-130474BLASTN svgBLASTP svg
NC_011770:49241274924127497209947973Pseudomonas aeruginosa LESB58, complete genome2e-130474BLASTN svgBLASTP svg
NC_015410:1324313*1324313135087526563Pseudomonas mendocina NK-01 chromosome, complete genome4e-110406BLASTN svgBLASTP svg
NC_010524:4644587*4644587468982245236Leptothrix cholodnii SP-6, complete genome6e-109402BLASTN svgBLASTP svg
NC_021150:34164503416450343409917650Azotobacter vinelandii CA6, complete genome4e-107396BLASTN svgBLASTP svg
NC_012560:34164513416451343409917649Azotobacter vinelandii DJ, complete genome4e-107396BLASTN svgBLASTP svg
NC_008752:415599*41559944209126493Acidovorax avenae subsp. citrulli AAC00-1, complete genome5e-94353BLASTN svgBLASTP svg
NC_010676:26584952658495270919750703Burkholderia phytofirmans PsJN chromosome 2, complete sequence2e-84321BLASTN svgBLASTP svg
NC_020209:38748443874844390437229529Pseudomonas poae RE*1-1-14, complete genome1e-73285BLASTN svgBLASTP svg
NC_007963:35004683500468352206621599Chromohalobacter salexigens DSM 3043, complete genome2e-69272BLASTN svgBLASTP svg
NC_007005:49927304992730502132828599Pseudomonas syringae pv. syringae B728a, complete genome2e-53218BLASTN svgBLASTP svg
NC_004431:35131473513147354268029534Escherichia coli CFT073, complete genome1e-51212BLASTN svgBLASTP svg
NC_009439:574437*57443759753523099Pseudomonas mendocina ymp, complete genome8e-50206BLASTN svgBLASTP svg
NC_005773:47972424797242481709919858Pseudomonas syringae pv. phaseolicola 1448A, complete genome3e-49204BLASTN svgBLASTP svg
NC_004741:3041294*3041294310468963396Shigella flexneri 2a str. 2457T, complete genome3e-49204BLASTN svgBLASTP svg
NC_004337:3049118*3049118311609966982Shigella flexneri 2a str. 301, complete genome3e-49204BLASTN svgBLASTP svg
NC_015410:61702061702063960722588Pseudomonas mendocina NK-01 chromosome, complete genome1e-48202BLASTN svgBLASTP svg
NC_015379:90890490890497110662203Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,3e-46194BLASTN svgBLASTP svg
NC_011894:200928*20092822402523098Methylobacterium nodulans ORS 2060, complete genome1e-45192BLASTN svgBLASTP svg
AP010958:36695003669500372827458775Escherichia coli O103:H2 str. 12009 DNA, complete genome4e-42180BLASTN svgBLASTP svg
NC_015740:636667*63666765977523109Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete7e-41176BLASTN svgBLASTP svg
NC_009434:60876560876568209973335Pseudomonas stutzeri A1501, complete genome2e-38168BLASTN svgBLASTP svg
NC_015857:1609670*1609670163209922430Brucella pinnipedialis B2/94 chromosome chromosome 1, complete6e-35157BLASTN svgBLASTP svg
NC_010742:1595065*1595065161869323629Brucella abortus S19 chromosome 1, complete sequence6e-35157BLASTN svgBLASTP svg
NC_010167:1085106*1085106110813423029Brucella suis ATCC 23445 chromosome II, complete sequence6e-35157BLASTN svgBLASTP svg
NC_010103:1577750*1577750160141623667Brucella canis ATCC 23365 chromosome I, complete sequence6e-35157BLASTN svgBLASTP svg
NC_007618:1593886*1593886161751623631Brucella melitensis biovar Abortus 2308 chromosome I, complete6e-35157BLASTN svgBLASTP svg
NC_006932:1596732*1596732161909922368Brucella abortus biovar 1 str. 9-941 chromosome I, complete6e-35157BLASTN svgBLASTP svg
NC_004310:1578918*1578918160110922192Brucella suis 1330 chromosome I, complete sequence6e-35157BLASTN svgBLASTP svg
NC_015138:32238632238634172219337Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete6e-26127BLASTN svgBLASTP svg
NC_008752:26190326190328210620204Acidovorax avenae subsp. citrulli AAC00-1, complete genome2e-25125BLASTN svgBLASTP svg
NC_015733:3736104*37361043837697101594Pseudomonas putida S16 chromosome, complete genome2e-22115BLASTN svgBLASTP svg
NC_008786:36818473681847370092519079Verminephrobacter eiseniae EF01-2, complete genome1e-20109BLASTN svgBLASTP svg
NC_015563:5162177*5162177518611723941Delftia sp. Cs1-4 chromosome, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_010002:2293670*2293670231767724008Delftia acidovorans SPH-1, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_014100:1144463*1144463117100626544Caulobacter segnis ATCC 21756 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_010338:4015928*4015928404982733900Caulobacter sp. K31, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_013446:41828784182878420121918342Comamonas testosteroni CNB-2, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_015740:26143172614317265004935733Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete3e-1591.7BLASTN svgBLASTP svg
NC_008258:25428632542863256544822586Shigella flexneri 5 str. 8401, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_004741:25264212526421254776721347Shigella flexneri 2a str. 2457T, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_004337:25482882548288256963421347Shigella flexneri 2a str. 301, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_010545:23600023600026072024721Corynebacterium urealyticum DSM 7109, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_014924:29619702961970298516923200Pseudoxanthomonas suwonensis 11-1 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_015740:15943761594376161634721972Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete5e-1487.7BLASTN svgBLASTP svg
NC_009434:17436961743696176409920404Pseudomonas stutzeri A1501, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_010645:3720501*3720501374549924999Bordetella avium 197N, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_014623:10036628*100366281006030023673Stigmatella aurantiaca DW4/3-1 chromosome, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_008340:27722327722330180624584Alkalilimnicola ehrlichei MLHE-1, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_002927:37168943716894377039253499Bordetella bronchiseptica RB50, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_002696:2829002*2829002285565626655Caulobacter crescentus CB15, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_014729:800892*80089282341022519Halogeometricum borinquense DSM 11551 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_014931:49855004985500500477719278Variovorax paradoxus EPS chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_013440:62586762586765122625360Haliangium ochraceum DSM 14365, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_004663:24377602437760248127943520Bacteroides thetaiotaomicron VPI-5482, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014910:2585747*2585747260852622780Alicycliphilus denitrificans BC chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_007336:60119060119062316121972Ralstonia eutropha JMP134 megaplasmid, complete sequence3e-0971.9BLASTN svgBLASTP svg
NC_007912:3466966*3466966348462717662Saccharophagus degradans 2-40, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_012997:36519933651993367433122339Teredinibacter turnerae T7901, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_012029:1525929*1525929155430628378Halorubrum lacusprofundi ATCC 49239 chromosome 1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007606:37551553755155377834323189Shigella dysenteriae Sd197, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010943:19381361938136195659918464Stenotrophomonas maltophilia K279a, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014365:2359760*2359760238225722498Desulfarculus baarsii DSM 2075 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009648:38036223803622385072747106Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013595:9149273*9149273917160722335Streptosporangium roseum DSM 43021, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008781:2925818*2925818294540419587Polaromonas naphthalenivorans CJ2, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012917:83372183372187179538075Pectobacterium carotovorum subsp. carotovorum PC1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014733:2201485*2201485222586124377Methylovorus sp. MP688 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014830:3156873*3156873318066423792Intrasporangium calvum DSM 43043 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015224:35875003587500361767930180Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,3e-0661.9BLASTN svgBLASTP svg
NC_020453:31035493103549312489221344Agromonas oligotrophica S58 DNA, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007519:1244198*1244198126883324636Desulfovibrio alaskensis G20 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg