Pre_GI: BLASTN Hits

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Query: NC_011601:273430 Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome

Start: 273430, End: 296258, Length: 22829

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Enteropathogenic Escherichia coli (EPEC) is an important cause of fatal infant diarrhea. EPEC induces diarrhea by attaching and effacing to host cells in the small intestine, inducing cytoskeletal rearrangements that result in pedastel formation, and then by introducing toxins into the host cell. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007946:289425*28942536040270978Escherichia coli UTI89, complete genome043180BLASTN svgBLASTP svg
NC_004431:364000*36400042492660927Escherichia coli CFT073, complete genome043050BLASTN svgBLASTP svg
NC_008253:334467*33446741611981653Escherichia coli 536, complete genome042700BLASTN svgBLASTP svg
NC_008563:318993*31899336258343591Escherichia coli APEC O1, complete genome036080BLASTN svgBLASTP svg
NC_010498:301000*30100034338442385Escherichia coli SMS-3-5, complete genome021880BLASTN svgBLASTP svg
NC_011751:348000*34800037070122702Escherichia coli UMN026 chromosome, complete genome019280BLASTN svgBLASTP svg
AC_000091:30371930371932647122753Escherichia coli W3110 DNA, complete genome016040BLASTN svgBLASTP svg
NC_000913:303719*30371932647122753Escherichia coli K12, complete genome016040BLASTN svgBLASTP svg
NC_010473:27994827994830350723560Escherichia coli str. K-12 substr. DH10B, complete genome014820BLASTN svgBLASTP svg
NC_011748:29908029908032372424645Escherichia coli 55989, complete genome011230BLASTN svgBLASTP svg
CU928145:29908029908032372424645Escherichia coli 55989 chromosome, complete genome011230BLASTN svgBLASTP svg
NC_009800:349592*34959238017230581Escherichia coli HS, complete genome06270BLASTN svgBLASTP svg
NC_011740:27374672737467275914021674Escherichia fergusonii ATCC 35469, complete genome03992BLASTN svgBLASTP svg
NC_013592:32128343212834324883336000Dickeya dadantii Ech586, complete genome01166BLASTN svgBLASTP svg
NC_008253:15348401534840155611921280Escherichia coli 536, complete genome0682BLASTN svgBLASTP svg
NC_014840:76232762329583419603Pantoea sp. At-9b plasmid pPAT9B03, complete sequence8e-127462BLASTN svgBLASTP svg
NC_003143:31159333115933313845922527Yersinia pestis CO92, complete genome7e-115422BLASTN svgBLASTP svg
NC_009792:36653693665369370602240654Citrobacter koseri ATCC BAA-895, complete genome9e-102379BLASTN svgBLASTP svg
NC_021066:37694053769405379116821764Raoultella ornithinolytica B6, complete genome3e-89337BLASTN svgBLASTP svg
AP010958:2134556*2134556215269018135Escherichia coli O103:H2 str. 12009 DNA, complete genome1e-66262BLASTN svgBLASTP svg
NC_002695:28939512893951291868324733Escherichia coli O157:H7 str. Sakai, complete genome1e-42182BLASTN svgBLASTP svg
NC_008563:20413452041345206368122337Escherichia coli APEC O1, complete genome7e-41176BLASTN svgBLASTP svg
NC_002655:91965491965493956619913Escherichia coli O157:H7 EDL933, complete genome2e-38168BLASTN svgBLASTP svg
NC_002695:91750991750994039822890Escherichia coli O157:H7 str. Sakai, complete genome2e-38168BLASTN svgBLASTP svg
NC_013850:21823372182337224909966763Klebsiella variicola At-22 chromosome, complete genome2e-35159BLASTN svgBLASTP svg
NC_002695:3468873*3468873351343744565Escherichia coli O157:H7 str. Sakai, complete genome2e-34155BLASTN svgBLASTP svg
NC_002655:3538656*3538656358072742072Escherichia coli O157:H7 EDL933, complete genome2e-34155BLASTN svgBLASTP svg
NC_002695:30193930193932873026792Escherichia coli O157:H7 str. Sakai, complete genome2e-31145BLASTN svgBLASTP svg
NC_002655:30194030194032759925660Escherichia coli O157:H7 EDL933, complete genome2e-31145BLASTN svgBLASTP svg
NC_004431:30126683012668303118918522Escherichia coli CFT073, complete genome9e-31143BLASTN svgBLASTP svg
NC_008563:15054051505405154006134657Escherichia coli APEC O1, complete genome4e-30141BLASTN svgBLASTP svg
NC_013421:55319355319358079227600Pectobacterium wasabiae WPP163, complete genome4e-30141BLASTN svgBLASTP svg
AP010958:3853082*3853082389809945018Escherichia coli O103:H2 str. 12009 DNA, complete genome1e-29139BLASTN svgBLASTP svg
NC_020063:2011019*2011019203659925581Enterobacteriaceae bacterium strain FGI 57, complete genome9e-28133BLASTN svgBLASTP svg
NC_011740:62140862140864031618909Escherichia fergusonii ATCC 35469, complete genome3e-27131BLASTN svgBLASTP svg
NC_013716:5141269*5141269517008828820Citrobacter rodentium ICC168, complete genome1e-26129BLASTN svgBLASTP svg
AP010958:22729192272919229869725779Escherichia coli O103:H2 str. 12009 DNA, complete genome1e-26129BLASTN svgBLASTP svg
NC_002695:21583142158314218207123758Escherichia coli O157:H7 str. Sakai, complete genome8e-25123BLASTN svgBLASTP svg
NC_013716:1756545*1756545177694320399Citrobacter rodentium ICC168, complete genome2e-22115BLASTN svgBLASTP svg
NC_007613:10380001038000106059922600Shigella boydii Sb227, complete genome3e-21111BLASTN svgBLASTP svg
NC_002655:19091391909139193312123983Escherichia coli O157:H7 EDL933, complete genome1e-20109BLASTN svgBLASTP svg
NC_008258:2045000*2045000206275017751Shigella flexneri 5 str. 8401, complete genome8e-19103BLASTN svgBLASTP svg
NC_004741:20097692009769203209922331Shigella flexneri 2a str. 2457T, complete genome8e-19103BLASTN svgBLASTP svg
NC_004337:20359452035945205669020746Shigella flexneri 2a str. 301, complete genome8e-19103BLASTN svgBLASTP svg
NC_010498:12101451210145123409923955Escherichia coli SMS-3-5, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_005966:18320661832066185759025525Acinetobacter sp. ADP1, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_020063:2531643*2531643255948527843Enterobacteriaceae bacterium strain FGI 57, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_011750:43900004390000444275952760Escherichia coli IAI39 chromosome, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_011751:4293966*4293966431867224707Escherichia coli UMN026 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_009800:2083465*2083465210667323209Escherichia coli HS, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010473:1712984*1712984174109928116Escherichia coli str. K-12 substr. DH10B, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_000913:1625500*1625500165193926440Escherichia coli K12, complete genome7e-1073.8BLASTN svgBLASTP svg
AC_000091:16270491627049165562928581Escherichia coli W3110 DNA, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_013501:176073*17607320175825686Rhodothermus marinus DSM 4252, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_019744:20500205004680426305Cylindrospermum stagnale PCC 7417 plasmid pCYLST.02, complete4e-0867.9BLASTN svgBLASTP svg
NC_011751:23270142327014235440227389Escherichia coli UMN026 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
CU928160:2091249*2091249211444123193Escherichia coli IAI1 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010468:1816359*1816359186342947071Escherichia coli ATCC 8739, complete genome2e-0765.9BLASTN svgBLASTP svg
CP002516:1902431*1902431192618823758Escherichia coli KO11, complete genome2e-0765.9BLASTN svgBLASTP svg
CP002185:2181936*2181936220473822803Escherichia coli W, complete genome2e-0765.9BLASTN svgBLASTP svg