Pre_GI: BLASTN Hits

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Query: NC_009092:3732390 Shewanella loihica PV-4, complete genome

Start: 3732390, End: 3755532, Length: 23143

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009092:15043631504363158010375741Shewanella loihica PV-4, complete genome1e-60242BLASTN svgBLASTP svg
NC_009092:3057319*3057319308409726779Shewanella loihica PV-4, complete genome8e-53216BLASTN svgBLASTP svg
NC_009092:19352811935281195928524005Shewanella loihica PV-4, complete genome1e-51212BLASTN svgBLASTP svg
NC_008321:32320003232000325409922100Shewanella sp. MR-4, complete genome7e-47196BLASTN svgBLASTP svg
NC_005139:178400017840001927839143840Vibrio vulnificus YJ016 chromosome I, complete sequence7e-44186BLASTN svgBLASTP svg
NC_004459:2443000*24430002588599145600Vibrio vulnificus CMCP6 chromosome I, complete sequence1e-42182BLASTN svgBLASTP svg
NC_011753:20185002018500203623417735Vibrio splendidus LGP32 chromosome 1, complete genome2e-38168BLASTN svgBLASTP svg
NC_008321:21900002190000221007020071Shewanella sp. MR-4, complete genome2e-38168BLASTN svgBLASTP svg
NC_013456:17430461743046176911826073Vibrio sp. Ex25 chromosome 1, complete genome2e-35159BLASTN svgBLASTP svg
NC_009092:32395003239500326129021791Shewanella loihica PV-4, complete genome6e-35157BLASTN svgBLASTP svg
NC_013456:1819421*1819421184038720967Vibrio sp. Ex25 chromosome 1, complete genome6e-32147BLASTN svgBLASTP svg
NC_008700:367949*36794939264724699Shewanella amazonensis SB2B, complete genome2e-28135BLASTN svgBLASTP svg
NC_015733:1680500*1680500170310522606Pseudomonas putida S16 chromosome, complete genome6e-26127BLASTN svgBLASTP svg
NC_004603:18975321897532193607538544Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete5e-23117BLASTN svgBLASTP svg
NC_009831:45399524539952458002840077Shewanella sediminis HAW-EB3, complete genome5e-20107BLASTN svgBLASTP svg
NC_008577:2910383*2910383292929118909Shewanella sp. ANA-3 chromosome 1, complete sequence5e-20107BLASTN svgBLASTP svg
NC_004347:1038253*1038253107053732285Shewanella oneidensis MR-1, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_011740:165363*16536318914823786Escherichia fergusonii ATCC 35469, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_008577:26042812604281264200637726Shewanella sp. ANA-3 chromosome 1, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_013456:1843000*1843000186410221103Vibrio sp. Ex25 chromosome 1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_011748:143755*14375516736523611Escherichia coli 55989, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_010498:153755*15375517756723813Escherichia coli SMS-3-5, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_009831:44479194447919447190923991Shewanella sediminis HAW-EB3, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_009801:143426*14342616609922674Escherichia coli E24377A, complete genome7e-1073.8BLASTN svgBLASTP svg
CU928145:143755*14375516736523611Escherichia coli 55989 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_014366:3653190*3653190367610422915Gamma proteobacterium HdN1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009997:26350252635025266689331869Shewanella baltica OS195, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_002506:298868*29886831909920232Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete4e-0867.9BLASTN svgBLASTP svg
NC_002506:32455232455235839733846Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete4e-0867.9BLASTN svgBLASTP svg
NC_015376:36313923631392365107419683Burkholderia gladioli BSR3 chromosome chromosome 2, complete4e-0867.9BLASTN svgBLASTP svg
AP010958:143358*14335816609922742Escherichia coli O103:H2 str. 12009 DNA, complete genome2e-0765.9BLASTN svgBLASTP svg
CP002516:3949061*3949061396781618756Escherichia coli KO11, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004431:153907*15390717771123805Escherichia coli CFT073, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010468:3835259*3835259385816422906Escherichia coli ATCC 8739, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012997:29416272941627297169930073Teredinibacter turnerae T7901, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015953:19838211983821200380019980Streptomyces sp. SirexAA-E chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014831:19066911906691195238745697Thermaerobacter marianensis DSM 12885 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_009092:13053551305355132893623582Shewanella loihica PV-4, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015514:33071993307199334464737449Cellulomonas fimi ATCC 484 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg