Pre_GI: BLASTN Hits

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Query: NC_009012:2100000 Clostridium thermocellum ATCC 27405, complete genome

Start: 2100000, End: 2123274, Length: 23275

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_014328:4471995*4471995450215530161Clostridium ljungdahlii ATCC 49587 chromosome, complete genome1e-33153BLASTN svgBLASTP svg
NC_020134:301500*30150033822836729Clostridium stercorarium subsp. stercorarium DSM 8532, complete9e-28133BLASTN svgBLASTP svg
NC_021182:4602683*4602683462770125019Clostridium pasteurianum BC1, complete genome3e-24121BLASTN svgBLASTP svg
NC_010723:223935*22393527475150817Clostridium botulinum E3 str. Alaska E43, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_004557:2711702*2711702274444632745Clostridium tetani E88, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_004557:2777291*2777291280449927209Clostridium tetani E88, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_003030:3324834*3324834334964224809Clostridium acetobutylicum ATCC 824, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_014655:1038352*1038352106236824017Leadbetterella byssophila DSM 17132 chromosome, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_015687:3326461*3326461335126824808Clostridium acetobutylicum DSM 1731 chromosome, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_014328:4387303*4387303445852771225Clostridium ljungdahlii ATCC 49587 chromosome, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_015687:1097447*1097447112292725481Clostridium acetobutylicum DSM 1731 chromosome, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_014410:403776*40377646022156446Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,7e-1383.8BLASTN svgBLASTP svg
NC_003030:1097625*1097625112310625482Clostridium acetobutylicum ATCC 824, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_012563:4004709*4004709403727332565Clostridium botulinum A2 str. Kyoto, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_010520:3837378*3837378385959922222Clostridium botulinum A3 str. Loch Maree, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_010516:3807780*3807780384035532576Clostridium botulinum B1 str. Okra, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_008262:2649289*2649289270467655388Clostridium perfringens SM101, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015555:327562*32756238328255721Thermoanaerobacterium xylanolyticum LX-11 chromosome, complete2e-1075.8BLASTN svgBLASTP svg
NC_014150:1006000*1006000102850522506Brachyspira murdochii DSM 12563 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_003869:2143892*2143892219937255481Thermoanaerobacter tengcongensis MB4, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_003366:27882682788268280968621419Clostridium perfringens str. 13, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_012778:688621*68862170872420104Eubacterium eligens ATCC 27750, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007503:2098980*2098980212712728148Carboxydothermus hydrogenoformans Z-2901, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010674:192951*19295121941726467Clostridium botulinum B str. Eklund 17B, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014538:1975385*1975385199467019286Thermoanaerobacter sp. X513 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014964:388458*38845844542856971Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, complete4e-0867.9BLASTN svgBLASTP svg
NC_015958:2251619*2251619232072969111Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_019970:336472*33647241533078859Thermoanaerobacterium thermosaccharolyticum M0795, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010729:1344903*1344903136284917947Porphyromonas gingivalis ATCC 33277, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008343:2020785*2020785204163920855Granulibacter bethesdensis CGDNIH1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_021182:3409199*3409199343177822580Clostridium pasteurianum BC1, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_013921:1977444*1977444203224454801Thermoanaerobacter italicus Ab9 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008593:196257*19625723516638910Clostridium novyi NT, complete genome3e-0661.9BLASTN svgBLASTP svg