Pre_GI: BLASTN Hits

Some Help

Query: NC_008435:3915110 Rhodopseudomonas palustris BisA53, complete genome

Start: 3915110, End: 3938099, Length: 22990

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Four different strains were isolated from 2 sites, one pristine and one polluted. Environmental bacterium with potential use in bioremediation. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008435:2658986*2658986275828699301Rhodopseudomonas palustris BisA53, complete genome05041BLASTN svgBLASTP svg
NC_008435:1215437*1215437131209196655Rhodopseudomonas palustris BisA53, complete genome05041BLASTN svgBLASTP svg
NC_008435:1131242*1131242118022248981Rhodopseudomonas palustris BisA53, complete genome05039BLASTN svgBLASTP svg
NC_007925:138927*13892717109932173Rhodopseudomonas palustris BisB18, complete genome7e-41176BLASTN svgBLASTP svg
NC_009937:5033152*5033152505948226331Azorhizobium caulinodans ORS 571, complete genome2e-31145BLASTN svgBLASTP svg
NC_011004:5520771*5520771554678126011Rhodopseudomonas palustris TIE-1, complete genome9e-28133BLASTN svgBLASTP svg
NC_010505:21038872103887213081426928Methylobacterium radiotolerans JCM 2831, complete genome1e-26129BLASTN svgBLASTP svg
NC_013858:47729847729850922131924Azospirillum sp. B510 plasmid pAB510d, complete sequence8e-22113BLASTN svgBLASTP svg
NC_011757:51027325102732513806935338Methylobacterium chloromethanicum CM4, complete genome8e-22113BLASTN svgBLASTP svg
NC_005296:5238882*5238882526489126010Rhodopseudomonas palustris CGA009, complete genome1e-20109BLASTN svgBLASTP svg
NC_008027:29090002909000292988020881Pseudomonas entomophila L48, complete genome5e-20107BLASTN svgBLASTP svg
NC_011757:5742290*5742290578349941210Methylobacterium chloromethanicum CM4, complete genome8e-19103BLASTN svgBLASTP svg
NC_011386:1727203*1727203175090123699Oligotropha carboxidovorans OM5, complete genome3e-18101BLASTN svgBLASTP svg
NC_013855:670285*67028569312522841Azospirillum sp. B510 plasmid pAB510a, complete sequence3e-18101BLASTN svgBLASTP svg
NC_013093:1909305*1909305193716827864Actinosynnema mirum DSM 43827, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_007643:15047581504758152909924342Rhodospirillum rubrum ATCC 11170, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_008463:2654014*2654014267605522042Pseudomonas aeruginosa UCBPP-PA14, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_011901:13983761398376142787629501Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete3e-1591.7BLASTN svgBLASTP svg
NC_013093:31578973157897318209324197Actinosynnema mirum DSM 43827, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_009937:53082530827690623825Azorhizobium caulinodans ORS 571, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_013855:558831*55883158109922269Azospirillum sp. B510 plasmid pAB510a, complete sequence5e-1487.7BLASTN svgBLASTP svg
NC_009439:860571*86057188549124921Pseudomonas mendocina ymp, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_007626:46887774688777471078422008Magnetospirillum magneticum AMB-1, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_007626:40380544038054406859930546Magnetospirillum magneticum AMB-1, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_009720:50790485079048510209923052Xanthobacter autotrophicus Py2, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_013851:3142182*3142182316259920418Allochromatium vinosum DSM 180 chromosome, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_008463:3503576*3503576352773524160Pseudomonas aeruginosa UCBPP-PA14, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_010172:798923*79892388030381381Methylobacterium extorquens PA1, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_011770:3735162*3735162376383628675Pseudomonas aeruginosa LESB58, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_011894:6418000*6418000644309925100Methylobacterium nodulans ORS 2060, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_012808:39729833972983399542222440Methylobacterium extorquens AM1, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_012808:594000*59400061960225603Methylobacterium extorquens AM1, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_015424:4251369*4251369427627324905Aeromonas veronii B565 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014973:26936722693672271365719986Geobacter sp. M18 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_009937:412302*41230243181319512Azorhizobium caulinodans ORS 571, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_002939:80579480579482823022437Geobacter sulfurreducens PCA, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_009092:15043631504363158010375741Shewanella loihica PV-4, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_009439:79449879449881473720240Pseudomonas mendocina ymp, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_011757:748223*74822379542247200Methylobacterium chloromethanicum CM4, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_015410:96952696952699007820553Pseudomonas mendocina NK-01 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_011894:40138304013830405852444695Methylobacterium nodulans ORS 2060, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010510:339879*33987937475134873Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, complete2e-1075.8BLASTN svgBLASTP svg
NC_010505:26909392690939272152230584Methylobacterium radiotolerans JCM 2831, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007963:11908471190847124782656980Chromohalobacter salexigens DSM 3043, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007626:35222653522265361842896164Magnetospirillum magneticum AMB-1, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_009937:43921084392108441736925262Azorhizobium caulinodans ORS 571, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_011386:27628862762886278874625861Oligotropha carboxidovorans OM5, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_011420:36550536550538963524131Rhodospirillum centenum SW, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_011757:5048714*5048714509121342500Methylobacterium chloromethanicum CM4, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_015684:13432511343251136676923519Oligotropha carboxidovorans OM5 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_010514:600060002855022551Methylobacterium radiotolerans JCM 2831 plasmid pMRAD03, complete3e-0971.9BLASTN svgBLASTP svg
NC_009092:1047500*1047500107272925230Shewanella loihica PV-4, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008570:23650023650025959923100Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_003919:28240002824000285062126622Xanthomonas axonopodis pv. citri str. 306, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_005085:24623246234912724505Chromobacterium violaceum ATCC 12472, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007005:40623114062311408347221162Pseudomonas syringae pv. syringae B728a, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007645:35811143581114360707925966Hahella chejuensis KCTC 2396, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010994:85950085950087980320304Rhizobium etli CIAT 652, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_020209:2119845*2119845214457424730Pseudomonas poae RE*1-1-14, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_004578:11537381153738117268818951Pseudomonas syringae pv. tomato str. DC3000, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_005773:38514333851433386927817846Pseudomonas syringae pv. phaseolicola 1448A, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_007519:27730002773000280551732518Desulfovibrio alaskensis G20 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_007778:1053462*1053462107959926138Rhodopseudomonas palustris HaA2, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009664:4423829*44238294686013262185Kineococcus radiotolerans SRS30216, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009664:570768*57076859843127664Kineococcus radiotolerans SRS30216, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009943:748788*74878877355124764Candidatus Desulfococcus oleovorans Hxd3, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_011757:51700051700055359936600Methylobacterium chloromethanicum CM4, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_012660:3689223*3689223371658727365Pseudomonas fluorescens SBW25 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_012808:1122341*1122341115920936869Methylobacterium extorquens AM1, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_006350:3957454*3957454398298825535Burkholderia pseudomallei K96243 chromosome 1, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_007005:2686551*2686551274062754077Pseudomonas syringae pv. syringae B728a, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007434:111607*11160713392422318Burkholderia pseudomallei 1710b chromosome I, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_007519:3240864*3240864326641325550Desulfovibrio alaskensis G20 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007964:41575004157500417736419865Nitrobacter hamburgensis X14, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008570:3083850*3083850310907525226Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008700:27883632788363281549227130Shewanella amazonensis SB2B, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015410:2505168*2505168253404528878Pseudomonas mendocina NK-01 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_020209:19865031986503202425537753Pseudomonas poae RE*1-1-14, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004129:57814135781413580497523563Pseudomonas fluorescens Pf-5, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_007492:33328393332839335417921341Pseudomonas fluorescens PfO-1, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014973:10715001071500110044928950Geobacter sp. M18 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_020209:45495634549563457659927037Pseudomonas poae RE*1-1-14, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_006177:10604281060428108247522048Symbiobacterium thermophilum IAM 14863, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008570:3777469*3777469380230024832Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009092:43376174337617437380536189Shewanella loihica PV-4, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009720:2489003*2489003251980530803Xanthobacter autotrophicus Py2, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010501:25118872511887254627834392Pseudomonas putida W619, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013851:31669693166969319361626648Allochromatium vinosum DSM 180 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014664:16145681614568163829223725Rhodomicrobium vannielii ATCC 17100 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014664:26695622669562269113921578Rhodomicrobium vannielii ATCC 17100 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014837:3633378*3633378366348330106Pantoea sp. At-9b chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015172:95155095155097409922550Syntrophobotulus glycolicus DSM 8271 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_019897:36698883669888369684126954Thermobacillus composti KWC4 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_002939:1480474*1480474150560725134Geobacter sulfurreducens PCA, complete genome3e-0661.9BLASTN svgBLASTP svg